KEGG   Sphingomonas panacis: AWL63_02400
Entry
AWL63_02400       CDS       T04760                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
span  Sphingomonas panacis
Pathway
span03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:span00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AWL63_02400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:span03019]
    AWL63_02400
Enzymes [BR:span01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AWL63_02400
Messenger RNA biogenesis [BR:span03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AWL63_02400
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Utp25_C AAA_22 P-loop_SecA CMS1
Other DBs
NCBI-ProteinID: AOH83001
UniProt: A0A1B3Z6F3
LinkDB
Position
complement(532149..533549)
AA seq 466 aa
MTFAKLGLAEPLVRALEAKGYSTPTPIQQQSIPMLLEGRDLLGIAQTGTGKTAAFVLPSI
QNLIANDKRILPTHCRMLVLAPTRELASQIADSARDYGKFSKMSVATVFGGVSINKNRQD
MSRGVDILVATPGRLLDLIEQRFVSLATLEILVLDEADQMLDLGFIHALKKIVRMLPKQR
QTLFFSATMPAAIRDLADQFLTDPATVKVAPVASTAERVDQFITLVNQSEKQALLTIHLR
NPEIERCLVFTRTKHGADRVVKLLAANGIASNAIHGNKSQPQRERALGEFKSGKVKVLIA
TDIAARGIDVSGVSHVFNFELPNVPEQYVHRIGRTARAGASGVAISFCADDEKPFLRDIE
RLTKVKLTPLPLPADFTAEQARIKAARPAGSDTPERRIDDSGRHRQGPRATHSARPTGER
PAGGAGRPAGQGRPGGQGRPAGGGGRPGGPRRQSSGGGGRRSPAAG
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgactttcgccaaactcggccttgccgaaccgctcgtccgcgcgctcgaagccaagggc
tattcgacccccacgccgatccagcagcagtcgatcccgatgctgctcgaaggccgcgat
ctgctcggcattgcgcagaccggcaccggcaagaccgccgctttcgtgcttccgtcgatc
cagaacctgatcgccaacgacaagcgtatcctgccgacgcattgccgcatgctcgtgctc
gcgccgacgcgcgagctcgccagccagatcgccgacagcgcgcgcgattacggcaaattc
tccaagatgagcgtcgccaccgtgttcggcggcgtcagcatcaacaagaaccgccaggac
atgagccgcggcgtcgatatcctcgtcgccacgccggggcgtctgcttgatctgatcgag
cagcgcttcgtcagcctcgcgacgctggagatcctcgtcctcgacgaggccgaccagatg
ctcgacctcggcttcatccacgcgctcaagaagatcgtgcggatgctgcccaagcagcgc
cagaccctgttcttctcggcgacgatgcccgccgcgatccgcgatctcgccgatcagttc
ctgaccgatcccgccaccgtcaaggtcgcgccggtcgcatcgaccgccgagcgcgtcgac
cagttcatcacgttggtgaaccagtcggagaagcaggcgctgctgacgatccatctgcgc
aacccggagatcgagcgttgcctcgtcttcacgcgcaccaagcacggcgcagaccgggtc
gtgaaactgctcgccgccaacggcatcgcgtccaacgcgatccacggcaacaagagccag
ccgcagcgcgaacgtgcgctcggcgagttcaagtcgggcaaggtcaaggtgctgatcgcg
accgacatcgccgcgcgcggcatcgacgtgtcgggcgtgagccacgtcttcaacttcgaa
ctgcccaacgtgcctgagcagtacgtccaccgcatcggccgcaccgcgcgcgccggcgcg
tcgggcgtggcgatcagcttctgcgcggacgatgagaagccgttcctgcgcgacatcgag
cggctgaccaaggtcaagctgacgccgctgccgctgccggccgatttcaccgccgagcag
gcccgcatcaaggcggcgcggccggccggatcggacacgcccgagcgtcgtatcgacgat
tcggggcgccaccgtcagggtccgcgcgccacgcattcggcacgcccgaccggcgagcgg
ccggcgggtggcgctggccgtcccgctggtcagggccgccccggcggtcagggtcgtccg
gccggcggtggcggtcgccccggtggcccgcgtcgccagtcgtcaggtggcggcggccgg
cgttcgcccgccgcgggctga

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