Sphingomonas panacis: AWL63_05145
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Entry
AWL63_05145 CDS
T04760
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
span
Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:
span00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
span03032
]
AWL63_05145
03400 DNA repair and recombination proteins [BR:
span03400
]
AWL63_05145
Enzymes [BR:
span01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AWL63_05145
DNA replication proteins [BR:
span03032
]
Prokaryotic type
DNA Topoisomerases
AWL63_05145
DNA repair and recombination proteins [BR:
span03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AWL63_05145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AOH83445
UniProt:
A0A1B3Z7N9
LinkDB
All DBs
Position
complement(1165728..1168301)
Genome browser
AA seq
857 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGSDYRVLASYGHVRDLPPKDGSVDPDDGFAMEWENYADKAR
QLKAITDEAKHADRLILATDPDREGEAISWHVQEVLRARKALPKDVQRVTFNAITKATVT
EAMKHPRELDTDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLIVERE
REIEAFRAQEYWSVTAQMEQDGTPFVARLTRWNGDKIDRLSIGDEGTALRAKADVEQGHF
TVQSVETKPATRNPPPPFTTSTLQQEAARKLGFSADHTMRIAQSLYEDGAITYMRTDGVQ
MDGSAISAARLAIANRYDAGYVPDKPRQYTSKAKNAQEAHEAIRPTDFSKDRAGAGDHGR
LYDLIWKRALASQMASARLERTTVELAEGTGRTALRATGQVVLFPGYLALYEEGTDDSQD
EDARRLPRMRDGDAPAKKAVDAEQHFTQPPPRFSEASLVKRLEELGIGRPSTYASIIKTL
KDRSYVRTEKNRFFAEESGRLVTAFLERFFERYVGYDFTAGLEDELDEVSGGRAQWQAVL
EAFWKDFKPRTTEVMEQKPSEVTAELDKFLAPYLFPERADGGDPRLCPSCGAGQLALRGG
KFGAFVACSNYPECKYTRRFGQGGAAEDGAALENEILGNDPETGLPVERKSGRFGPYIQL
GDGKEAKRASIPKDVPELDLEWALKLLSLPRTIGTHPETGQPINAAIGRYGPYLVHDGKY
ARLTSTAEVFETGMNAAVVKLAEAAAGGGRPQRGAAREPLKVLGKHPRTEAEIKLMEGRY
GAYVTDGETNATLPKSIEKDALTLEEAAQLIDARAAAAPAKPKKKAPAKKAAAKKPAAAK
TAKAPAKKAAPKVAKKA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgtcatcgtcgaatcgcccgccaaggcgaaaaccatcgagaaatacctcggc
tccgattaccgggtgctggcaagctacggccatgtccgcgatctgccgcccaaggacggc
tcggtcgatcccgacgacgggttcgcgatggagtgggaaaactatgccgacaaggcgcgg
caactcaaggcaatcaccgacgaggccaaacacgccgaccgtctgatcctcgcgaccgat
cccgatcgcgagggcgaagcgatttcgtggcacgtgcaggaggtgctgcgcgcccgcaag
gcgctgcccaaggatgtccagcgcgtgacgttcaacgccatcaccaaggcgaccgtcacc
gaggcgatgaagcatccgcgcgagctcgataccgatctgatcgatgcgtaccgggcgcgc
cgcgcgctcgactatctggtcggcttcacgctgtcgccggtgctgtggcgcaagctgccc
ggcgcgaaatcggcgggccgtgtccagtcggtcgcactccggctgatcgtcgagcgcgaa
cgcgagatcgaggcgttccgggcacaggaatattggtcggtcaccgcgcagatggagcag
gacggcacgccgttcgtcgcgcgcctcacgcgctggaacggcgacaagatcgatcgcctg
tcgatcggcgacgaagggaccgcgctcagggccaaggcggatgtcgagcagggccatttc
accgtccagtcggtcgagaccaagcccgccacgcgcaacccgccgccgccgttcaccacc
tcgaccttgcagcaggaggccgcgcgcaagctcggcttctcggccgatcacacgatgcgg
atcgcgcagagcctctacgaagacggcgcgatcacctatatgcggaccgacggcgtgcag
atggacggcagcgccatttccgccgcgcggctcgcgatcgccaaccgctatgacgctggc
tacgtgcccgacaagccgcgccagtatacgtcgaaggcgaagaacgcgcaggaagcccac
gaggcgatccgcccgaccgatttcagcaaggaccgcgccggcgctggcgatcatggccgg
ttgtacgatctgatctggaagcgtgcgctcgccagccagatggcatcggcgcggctcgag
cgcaccacggtcgaactggccgagggcaccggacgcaccgccttgcgcgccaccgggcag
gtcgtgctgttccccggttatctcgcgctgtacgaggaaggcaccgacgacagccaggac
gaggacgcccgccgcctcccccgcatgcgtgacggcgatgcgccggccaagaaggcggtc
gatgccgagcagcatttcacccagccgccgccgcgcttctcggaggcgagccttgtcaag
cggctcgaggaactcggcatcggccggccctcgacctatgcgtcaatcatcaagacgctc
aaggatcgctcctacgtccgcaccgagaagaaccgcttcttcgccgaggagagcgggcga
ctggtgacggcgttcctcgaacgcttcttcgaacgctatgtcggttacgatttcaccgcc
ggcctggaggacgaactcgacgaggtttcgggcggacgcgcgcagtggcaggcggtgctc
gaagcgttctggaaggacttcaaaccgcgcaccaccgaagtgatggagcagaagccgtcc
gaagtgaccgcggaactcgacaagttcctcgcgccctatctgttccccgaacgggccgat
ggcggcgatccgcggctgtgcccgagctgcggcgcggggcagctcgcgctgcgcggcggc
aagttcggcgcgttcgtggcgtgctccaactaccccgagtgcaaatacacccgccgcttc
ggccagggcggggcggccgaggatggcgccgcgctcgagaacgaaattctcggcaatgat
cctgagaccggcctgccggtcgaacgcaaatccgggcggttcgggccgtacatccagctt
ggcgacggcaaggaagcgaagcgcgcgtctatccccaaggacgtgcctgaactcgatctc
gaatgggcgctgaagctgctgtcactgccgcgcacgatcgggacgcatcccgagaccggc
cagccgatcaatgcggcgatcgggcgctatggtccgtatctggtccatgacggcaagtac
gcgcggctgacctcgacggcggaggtgttcgagaccggtatgaacgcggcggtggtcaag
ctcgccgaagcggccgcaggcggcgggcgtccgcagcgtggcgcggcgcgcgagcccttg
aaggtgctcggcaagcatccgcgcaccgaggcggagatcaagctgatggagggccgctat
ggcgcctatgtcaccgatggcgagaccaatgcgactctgcccaagtcgatcgaaaaggac
gcgctgacgcttgaggaagccgcgcaactgatcgacgcgcgcgcggccgccgcaccggcc
aagcccaagaagaaggcgcccgcgaaaaaggctgctgccaagaagccggcggccgcaaag
accgccaaggcacccgccaagaaggcggcgcccaaggtcgcgaagaaagcctga
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