KEGG   Sphingomonas panacis: AWL63_05800
Entry
AWL63_05800       CDS       T04760                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
span  Sphingomonas panacis
Pathway
span03030  DNA replication
span03410  Base excision repair
span03420  Nucleotide excision repair
span03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:span00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWL63_05800
   03410 Base excision repair
    AWL63_05800
   03420 Nucleotide excision repair
    AWL63_05800
   03440 Homologous recombination
    AWL63_05800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:span03032]
    AWL63_05800
   03400 DNA repair and recombination proteins [BR:span03400]
    AWL63_05800
Enzymes [BR:span01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AWL63_05800
DNA replication proteins [BR:span03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AWL63_05800
DNA repair and recombination proteins [BR:span03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AWL63_05800
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AWL63_05800
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1
Other DBs
NCBI-ProteinID: AOH83555
UniProt: A0A1B3Z7Z3
LinkDB
Position
1313104..1315860
AA seq 918 aa
MPHLYLVDGSGYIFRAYHRLPPLTNKHGEPVGAVYGYTTMLWKLADELHKADGPTHMAVI
LDKSSKTFRNDLYDQYKAHRPPPPEDLVPQFPMIRDATRAFSLPCIEEEGLEADDIIAGY
TKAALAQGWQVTIVSSDKDLMQLMTDPSVDMYDTMNNRRLGPDHVFEKFGVGPDKLGDVL
ALMGDSVDNVPGVTGVGPKTASKLILEHGDLEGVLAAAEGMKKGKLRDNLIAQADNARLS
KVLVTLKCDAPLPEPLDDLALQGIPDAPLRVFLEHHGFKSLLAKLSAVADAPVAAPTSVP
QEEDPPCEHDGYETVVDEAALDGWIESARHQGWIAVDTETTGIDATRAELVGISLALQPN
RACYVPLGHGGTGLFAETPPQIDTAVALAKLKPLLEDPAVLKIGHNLKYDMIVLGRLGID
VAPFDDTILMSFDLDAGLHGHGMDELAATHLSHSCIAFKDVVGVGKSQRQFNEIDLDAAT
RYAAEDADVTLRLWRRFKPRLAAEQVTRVYEMVDRPLVPVVAQMERHGIKVDREKLAGLS
TAFSTQIAGLETEIHALAGGPFTIGSPKQLGDVLFERMGIKGGRKGKSGVYSTDVNELER
IAADRDSPGVEIAGKVLEWRQLSKLKSTYTDALQAQINPATGRVHTSYSLTGAQTGRLSS
TDPNLQNIPIRTEIGRQIRDAFVADAGNVILAADYSQIELRLAAHMADVPQLREAFASGA
DIHSLTAQELFGEVNRDTRGRAKTINFAILYGISRWGLAGRLDVTADEAQAMIDRYFERF
PGIRNYIAATTEFVRENGYTVTLFGRKTHFPRISSKVQHERQGAERAAINAPIQGTSADI
IKRAMVRMGPALAEAGLGHVRMLLQVHDELVFELPEGDVAAARPVIERVMASAAEPAVML
SVPLGVEIGVGPSWGAAH
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgcctcatctctatcttgtcgacggctcgggctatatcttccgcgcctatcatcgcctc
ccgccgctcaccaacaagcatggcgagccggtgggtgcggtctatggctatacgacgatg
ctgtggaagctcgccgacgaactccacaaggccgatggcccgactcacatggcggtcatc
ctcgacaaatcctctaagacgttccgcaacgatctgtacgatcagtacaaggcgcaccgg
ccgccgccgcccgaggatctcgtcccccaatttccgatgatccgcgacgcgacgcgcgcc
ttctcgctgccgtgcatcgaggaggaaggtctggaggcggacgacatcatcgccggctac
accaaggccgcgctcgcccaagggtggcaggtgacgatcgtgtcttcggacaaggatctg
atgcagttgatgaccgatccgtcggtcgacatgtacgatacgatgaacaaccggcggctc
gggccggatcatgtcttcgaaaagttcggcgtcggccccgacaagctcggcgacgtgctc
gcgctgatgggcgacagcgtcgataacgtgccgggcgtcaccggcgtcgggccgaagacc
gcgtccaagctgatcctcgaacatggcgatctcgaaggcgtgctcgccgccgccgagggg
atgaaaaaaggcaagctgcgcgacaatctgatcgcgcaggccgacaatgcgcggctgtcc
aaggttctcgtcacgctcaaatgcgacgcgccattgcccgagccgctcgacgatctcgcg
cttcagggcattcccgatgcacccttgcgcgtcttcctcgaacatcacggcttcaagtcg
ctgctcgccaagctgagcgcggtcgccgatgcgccggtcgcggcgccgaccagcgtgccg
caggaggaagatccgccctgcgaacacgacgggtatgagacggtggtggacgaggccgcg
ctcgacggatggatcgagagcgcgcggcatcagggctggatcgcggtcgataccgagacc
accggcatcgacgcgactcgcgccgagctggtcgggatcagcctcgcgcttcagcccaac
cgcgcctgctacgtgccgctcggccacggcggcaccgggctgttcgccgagacgccgccg
cagatcgacaccgctgtcgcgctggcgaagctcaagccgctgctcgaagacccggcggtg
ctcaagatcgggcataatctcaaatacgatatgatcgtattgggccggctcggcatcgat
gtcgcgccgttcgacgacacgatcctgatgagcttcgatctcgacgccgggctgcacggc
cacggcatggacgagcttgccgcgacgcatctttcgcatagctgcatcgcgttcaaggac
gtggtcggcgtgggcaagagccagcgccagttcaacgaaatcgatctcgacgccgcgact
cgctacgccgccgaggatgccgatgtgacgctgcggctgtggcggcgcttcaagccgcgc
ctcgccgccgagcaggtgacgcgcgtctacgagatggtcgatcgtccgctggtgccggtg
gtggcgcagatggagcgacacggcatcaaggtcgatcgcgagaagctcgccgggctatcg
acggcattctccacgcagatcgcaggcctcgaaaccgagatccacgcgctcgccggcggg
ccgttcacgatcggcagccccaagcaactgggtgatgtgctgttcgagcggatgggcatc
aagggcgggcgcaagggcaagtcgggggtctattcgaccgacgtcaacgagcttgagcgg
attgccgccgaccgcgattcgcccggggtggagatcgccggcaaggtgctcgaatggcgc
cagctctctaagctcaaatcgacctataccgatgcgctccaggcgcagatcaaccccgcg
acgggacgggtccacaccagctacagcctgaccggcgcgcagaccgggcgactgtcctcg
accgatccgaacctccagaacatcccgatccgtaccgagatcggccggcagattcgcgat
gcgttcgtggcggatgcgggcaacgtcatcctcgctgccgattattcgcagatcgagctt
cgcctcgccgcgcacatggccgacgtgccgcagttgcgcgaggcgttcgcgagcggcgcg
gacatccacagcctgaccgcgcaggagctgttcggcgaggtcaaccgcgatacgcggggg
cgcgccaaaacgatcaacttcgcgatcctctacggcatctcgcgctgggggctggccggg
cggctcgacgtgaccgccgacgaggcgcaggcgatgatcgaccgctatttcgagcgcttc
ccgggcatccgcaactatatcgccgcgaccaccgagttcgtccgcgagaacggctatacc
gtcaccttgttcgggcggaagacgcacttcccgcgcatctcatccaaggtccagcacgag
cggcagggcgccgaacgcgccgcgatcaacgcgccgatccagggcacgtcggcggacatc
atcaagcgcgcgatggtgcggatggggccggcgctggccgaggccgggctgggccatgtc
cgcatgctgctgcaggtgcatgacgaactcgtgttcgaactgcccgaaggcgacgtggcg
gcggcgcggccggtgatcgagcgcgtgatggcgagcgccgccgaaccggcggtgatgttg
tcggtgccgctcggcgtcgagatcggcgtcgggccgagctggggcgcggcgcattga

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