Sphingomonas panacis: AWL63_11345
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Entry
AWL63_11345 CDS
T04760
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
span
Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:
span00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
span03016
]
AWL63_11345
Enzymes [BR:
span01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AWL63_11345
Transfer RNA biogenesis [BR:
span03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AWL63_11345
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Exotox-A_cataly
Motif
Other DBs
NCBI-ProteinID:
AOH84473
UniProt:
A0A1B3ZAL5
LinkDB
All DBs
Position
2534066..2534605
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AA seq
179 aa
AA seq
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MHRLFVALRPPRAIRLHLADVMHGIGDARWQDDDQLHLTVRYIGEVDRRMAEDIAVELGH
VHGHAITAAVAGVGAFDRRGRIDALWAGLTPHDALAALHRKVDHALVRLGLPPEGRAYLP
HITLARLPRTADPHEIERWRAAQAGLASAPFTMEHLILFESTLGAGGARYDTIARWPLG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgactttttgttgctctccgcccgccgcgtgccatccgcctgcaccttgccgac
gtgatgcacggcatcggtgacgcgcgctggcaggatgacgaccagttgcacctgacggtc
cgctatatcggcgaggtcgaccggcgcatggcggaggatatcgcggtggaacttggccat
gtccacgggcacgcgatcacggcggcggtggcgggtgtcggcgcgttcgaccggcgcggg
cggatcgacgcgttatgggcggggctgaccccacatgatgcactggccgcgcttcaccgc
aaggtcgatcacgcgctggtgcggctcggcctgccgcccgaggggcgcgcctatctgccg
cacatcacgctcgcccggctgccgcgcaccgccgatccgcacgaaatcgaacgctggcgc
gcggcgcaggcggggctggcgagcgcgccgttcacgatggagcatctgatcctgttcgaa
agcaccctcggcgccgggggtgcgcgctatgatacgatcgcgcgctggccgctgggttga
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