Sphingomonas panacis: AWL63_13850
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Entry
AWL63_13850 CDS
T04760
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
span
Sphingomonas panacis
Pathway
span03030
DNA replication
span03430
Mismatch repair
span03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
span00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWL63_13850
03430 Mismatch repair
AWL63_13850
03440 Homologous recombination
AWL63_13850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
span03032
]
AWL63_13850
03400 DNA repair and recombination proteins [BR:
span03400
]
AWL63_13850
Enzymes [BR:
span01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWL63_13850
DNA replication proteins [BR:
span03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWL63_13850
DNA repair and recombination proteins [BR:
span03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWL63_13850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AOH84881
UniProt:
A0A1B3ZBT6
LinkDB
All DBs
Position
3054767..3058261
Genome browser
AA seq
1164 aa
AA seq
DB search
MAHSAFVPLRIFSCYTMLDGAIDPKAIAKRAQELGFPAAALTDRNGLYAAMAYSDAAKKA
GVQPVIGTMLGVARPDLPEGVEPVFDWLALYAQDEAGYRNLCELVSKAHLDRPLEHAPHV
SFEMLARHTDGLIALTAGREGGLARLFAEDQPARALAYADRLQALFADRLYIELTRRLDP
IEGKAEAPLLDLAYARDLPLVATNPCCFAEADFVEAHDAMLCIASSSYLASEDRPRSSPD
AWMKPAAEMRTLFADLPEAIANTLVVAQRCAVAAPYRKPILPSLAGDREGEAEALRVTSR
SGLEARLAKAKITDPALRATYAERLEFELDVIISMGFPGYFLIVGDFIKWAKDHDIPVGP
GRGSGAGSVVAWALTITDLDPIKLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQE
KYGRDQVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLVPNFPADPWTLDRAMNGV
SELVAEYKGNAGVKHLLDLAMKLEGLPRHSSTHAAGVVIGDRPLAELVPLYRDPRSDMPV
TQFDMKYVEGAGLVKFDFLGLKTLSVLQKAVQMLADRGVTIDLSALEWDDEGVYKLLQKG
DTVGVFQLESEGMRRTLAAVKPSNFGDIIALVSLYRPGPMDNIPSFGRRKNGQEPIEYPH
ALLEPILAETYGIFVYQEQVMQATQILAGYSLGGADLLRRAMGKKIKAEMDAQRAIFVAG
CAEHNQIPAAKANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHHPHEFFAASMCY
DMALTDKLSIFVDDMRRLGVAILPPDINRSEAEFSVEDTGSEESHGLAVRYALGALKSVG
EAAMEKLIVEREANGKFATLDDLAHRVDPRLLNKRQLETLAGAGAFDAFTPNRAGIHAAA
ETILATASRVQSMRASGQGGLFGGEDAAEPPIRLPNAHWPLAERMEAEKEAFGFYFSAHP
VDRHGHLARMHGARSYATLGELDIPDDGKSRAGAMMAVLVEDARWRTSARGRRYLMATLS
DPSGQFIATCFDDVVAADLEEAAREGACGLLTVELDRRPGEETPRVSVKRLQRFDSLATA
ARFVLDLTVEAPAAMQTLAGVLADHRGARGEVWAKAAMPDGGFARVLLGRDFLLDQELAT
RIEGLPGISGVALKTSETRLALVG
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcccattccgcgttcgttccgctgcgtatcttctcctgttacaccatgctcgacggg
gcgatcgaccccaaggcgatcgccaagcgcgcgcaggaactgggcttccccgccgccgcg
ctgaccgatcgcaacggcctgtatgcggcgatggcctattccgatgcggccaagaaagcc
ggcgtccagccggtgatcggcacgatgctgggcgtcgcgcggcccgatctgcccgagggc
gtcgagccggtgttcgactggctggcgctctacgcgcaggacgaggctggctatcgcaat
ctgtgcgaactggtgtcgaaggcgcatctcgaccggccgctcgaacacgcgccgcatgtc
tcgttcgagatgctcgcccggcacacagacgggctgatcgcgctcaccgccgggcgcgag
ggggggctggcgcggctgttcgccgaggaccagccggcgcgcgcgctcgcctatgccgat
cgcctgcaggcgctgttcgccgaccggctgtatatcgaactgacccggcggctcgatccg
atcgaaggcaaggccgaagctccgttgctcgacctcgcctatgcgcgcgatctgccgttg
gtcgcgaccaacccgtgctgcttcgccgaggcggatttcgtcgaggcgcatgatgcgatg
ctgtgcatcgccagttcgtcatacctggccagcgaggatcgcccgcgcagttcacccgat
gcgtggatgaagcccgccgccgagatgcggaccctgttcgccgatctgcccgaggcgatc
gccaacacactcgtcgtcgcgcagcgctgcgcggtggcggcaccgtatcgcaagccgatc
ctgccgagccttgccggcgaccgcgagggcgaggccgaggcgttgcgcgtcacctcgcgc
agcgggctggaggcccggctcgccaaggcgaagatcaccgatcccgcgttgcgcgccacc
tatgccgagcggctcgaattcgaactcgacgtcatcatctcgatgggattccccggctat
ttcctgatcgtcggcgacttcatcaaatgggcgaaggaccacgacattccggtcgggccg
gggcgcggatcgggcgcaggctcggtggtggcgtgggcgctgacgatcaccgatcttgat
ccgatcaagctcgggctgctgttcgaacgcttcctcaacccggaacgcgtgtcgatgccc
gacttcgacatcgatttctgcgaaacccggcgtggcgaggtgatccgctacgtgcaggag
aaatacgggcgcgatcaggtcgcgcagatcatcacgttcggaaagctcaaggcgcgcgcg
gtgctcaaggataccggccgcgtgctccagatgagctacggtcaggtcgatcggctggcg
aagctggtccccaacttcccggccgacccgtggacgctcgatcgcgcgatgaacggcgtg
tccgaactcgtcgccgagtacaagggcaacgccggggtcaagcatctgctcgatctggcg
atgaagctggaggggctgccacgccactcctcgactcacgccgccggcgtggtgatcggc
gaccgcccgctcgccgagctggtgccgctgtaccgcgatccgcgctcggacatgccggtc
acgcagttcgacatgaaatatgtcgagggcgcggggctggtgaagttcgacttcctcggc
ctcaagacgctgtcggtgttgcagaaggcggtgcagatgctcgctgaccggggcgtgacg
atcgacctgtcggcgctcgaatgggatgacgaaggcgtctacaagctgctccagaagggt
gacacggtcggcgtgttccagctcgaatcggaggggatgcggcgcacgctggcggcggtg
aagccgtccaatttcggcgacatcatcgcgctcgtctcgctgtaccggccgggtccgatg
gacaatatcccgagcttcggccgccgcaagaacgggcaggaaccgatcgaatatccgcac
gcattgctcgaaccgatcctggccgagacctacggcatcttcgtctaccaggagcaggtg
atgcaggcgacgcagatcctcgccggctattcgctgggcggggccgatctgctgcgccgc
gcgatgggcaagaagatcaaggccgagatggacgcacaacgtgcgatcttcgtcgcgggc
tgcgccgagcacaaccagatccccgccgccaaggccaacgaactgttcgatttgatcgac
aagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcgctgctcgcgtac
cagacggcgtggctcaaggcgcatcacccgcacgaatttttcgcagcgtcgatgtgctac
gacatggcgctgaccgacaagctcagcatcttcgtcgatgacatgcggcgcttgggcgtg
gcgatcctgccgcccgacatcaaccgcagcgaggcggaattctcggtcgaggatacgggc
agcgaggaaagccacggcctggcggtgcgctatgcgctcggcgcgctgaagagcgttggc
gaggccgcgatggagaagctgattgtcgagcgcgaggccaatggcaagttcgccacgctc
gacgatctcgcgcaccgcgtcgatccgcggctgctcaacaagcggcagttggagacgctg
gcgggcgcgggcgcgttcgacgcgttcacccccaatcgcgccggcatccacgccgccgcc
gagacgattctagcgacagcgtcgcgcgtgcaatcgatgcgcgcgagcgggcagggcggg
ctgttcggtggcgaggacgccgccgaaccgccgattcgcctgcccaatgcacattggccg
ctcgccgagcggatggaggcggagaaggaggcgttcggcttctatttctcggcgcacccg
gtcgatcgccatggtcacctcgcgcggatgcacggcgcgcgcagctatgcgacgctgggc
gaactcgacattcccgacgacggcaaatcgcgcgccggggcgatgatggcggtgctggtg
gaggacgcgcgctggcgcacctcggcgcgcggacggcgctacctgatggcgacgctgtcc
gatccctcgggccagttcatcgcgacctgtttcgacgatgtcgtcgccgccgatctggag
gaggccgcacgtgaaggcgcgtgcgggctgctgacggtggaactcgatcgccggccaggc
gaggagacgccgcgcgtttcggtcaagcggctgcagcggttcgattcgctggcgaccgca
gcgcgcttcgtgctcgacctcaccgtggaggcgcctgcggcgatgcagacgcttgccggc
gttctcgccgaccatcgcggcgcgcgcggcgaagtatgggctaaggcggcgatgccggac
ggcgggttcgcgcgcgtgctgctcggccgcgacttcctgctcgatcaggaactcgcgacg
cggatcgagggactgcccgggatcagcggcgtcgcgttgaagacgtcagaaacgcggctg
gcgctggtcgggtaa
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