Sphingomonas panacis: AWL63_14050
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Entry
AWL63_14050 CDS
T04760
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
span
Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:
span00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
span03016
]
AWL63_14050
Enzymes [BR:
span01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AWL63_14050
Transfer RNA biogenesis [BR:
span03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AWL63_14050
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AOH84913
UniProt:
A0A1B3ZBV5
LinkDB
All DBs
Position
complement(3096643..3097818)
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AA seq
391 aa
AA seq
DB search
MHIHPLITDSATLANLCTRLAEADFVCVDTEFMRENTFWPELCLIQIADENEAAAIDPMA
PGLDMQPLLDLMVNNPDVLKVFHAGGQDLEIVYNLTGKTPYPLFDTQVAAMALGQGEQIG
YSNLVDAYLGISVDKGARFTDWSRRPLDARQIEYAIGDVTHLAKIFPKMLARLRKTGRGA
WLDQEMERIGDPANYANDPEEAWRRIRVPSRKADILGRLKALARWRELEAQGKNLPRGRI
VKDETIADIAGHPPRKQADLAKVRGLSPTWATNDIGGRMMVALEHAEPMPAEEMPARDDR
KPGLGKDGALVADLLKLLLKIRSRDIDVAARLLARGDDLDALAAGQREGLSILEGWRFEQ
FGRDALDLVEGRLAFAVVGGKLKMTRAETVE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcatatccatccgctcattaccgacagcgccacgctcgccaatctctgcacccgcctc
gccgaagccgatttcgtctgcgtcgataccgagttcatgcgcgagaacaccttttggccc
gaactgtgcctgatccagatcgccgacgagaacgaggcggcggcgatcgatccgatggcg
cccggcctcgacatgcagccgctgctcgacctgatggtcaacaacccggacgtgctcaag
gtcttccacgccggcgggcaggatctcgaaatcgtctataaccttaccggcaagacgccc
tatccgctgttcgacacgcaggtcgccgcaatggcgctggggcaaggcgaacagatcggc
tattcgaacctcgtcgatgcttatctcggcatcagcgtcgacaagggcgcgcgctttacc
gactggagccgccgtccgctcgacgcgcgccagatcgaatatgcgatcggcgacgtgact
cacctcgccaagatcttccccaagatgctcgcacggcttcgcaaaaccgggcgcggcgcg
tggctcgatcaggagatggagcgaatcggcgaccccgccaactacgccaacgatcccgaa
gaagcgtggcgccgcatccgcgtgcccagccgcaaggccgatatcctcggccgcctcaag
gcgctggcgcgctggcgcgaactggaggcgcagggcaaaaacctcccgcgcggccgaatc
gtcaaggatgagacgatcgccgacatcgccggccacccgccgcgcaaacaggccgacctc
gccaaggttcgcggcctctccccgacctgggcgaccaacgacatcggcggccgcatgatg
gtcgcactggaacatgccgagccgatgcccgccgaggagatgcccgcgcgcgacgatcgc
aagcccggtctgggtaaggacggcgctttggtggcggacctgctcaagctgcttctaaaa
atccgctcacgcgacatcgacgtggcggcacggctgctcgcgcgcggcgatgatctcgat
gcgctcgcagcgggccagcgtgaggggctgtcgattttggaggggtggcgcttcgaacaa
ttcggccgcgatgcgctcgatctggtcgaggggcggctggcgttcgcggtggtgggcggc
aagctcaagatgactcgcgcggaaacggtggagtga
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