KEGG   Sphingomonas panacis: AWL63_16705
Entry
AWL63_16705       CDS       T04760                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
span  Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:span00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:span03032]
    AWL63_16705
   03036 Chromosome and associated proteins [BR:span03036]
    AWL63_16705
   03400 DNA repair and recombination proteins [BR:span03400]
    AWL63_16705
DNA replication proteins [BR:span03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AWL63_16705
Chromosome and associated proteins [BR:span03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AWL63_16705
DNA repair and recombination proteins [BR:span03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AWL63_16705
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 DUF2267 VWA_3
Other DBs
NCBI-ProteinID: AOH85338
UniProt: A0A1B3ZD25
LinkDB
Position
complement(3728617..3728889)
AA seq 90 aa
MNKQELIGTVADASGLSKGDASKAVESVFDAISEALKKGDEVRLVGFGTFSVSKRKASTG
RNPRTGEPMTIKASSQPKFKAGKGLKDSVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagcaggagttgatcggcacggtcgccgacgcatcgggtctcagcaagggcgat
gcgagcaaggcggtcgagtcggtgttcgacgcgatctccgaggcactcaagaaaggcgac
gaggttcgtctggtcggtttcgggacgttttcggtgagcaagcgcaaggcctcgaccggc
cgcaacccgcgcaccggcgagccgatgacgatcaaggcatcgtcacagcccaagttcaag
gcgggcaagggcctcaaggattcggtgaactga

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