Sphingomonas panacis: AWL63_17310
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Entry
AWL63_17310 CDS
T04760
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
span
Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:
span00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
span03400
]
AWL63_17310
Enzymes [BR:
span01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWL63_17310
DNA repair and recombination proteins [BR:
span03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AWL63_17310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
HTH_62
Motif
Other DBs
NCBI-ProteinID:
AOH85435
UniProt:
A0A1B3ZDC5
LinkDB
All DBs
Position
complement(3851667..3854645)
Genome browser
AA seq
992 aa
AA seq
DB search
MTSSGKPQLYTIPAHRAFADSLAAGLIRRFGEQPLGLARGLVLLPNNRAKRAVTDAFVRA
SGGGLLLPRLVALGDPALDEAAGAALDPADEADPVPPAVAPMQRRLILARLVAAARERAG
QPTDAAEAVRLAGDLARTLDQLLVEEVPPQRLREIDLGEELSTHWHRALDLFGLVLDRWP
AELARLGCIDLADRRARLLRRLAVRWKDAPPAGFVCAAGVTDTAPAVAALLRRVAMLERG
MVVFADLATAMDEPEWQALGPHAPDPVTGIIRRSIETHPQFHLKLLLDRMGFNRAEVSVW
RGGSEFDATVARGKAIASALAPADFTGKWTDLPAAERRLAGIEAAELATPGEEAQAIALA
LRQALETPERTAALVTPDRALARRVAAHCKRWGIDIDDTAGRPLSILPSGTLLLALADAA
AQRFAPLALLTLLKHPLVCAGEGRRGWLEGARKLDRVLRGPRPAAGLAGVDSHLADAPKR
EAARRAAAAVWWPEARALLAPLEAVFEAGAQPLGTLVAALRETAQALCGDTLWSGPAGRA
ASDFLADIEARADEGPALVDPDSLAALLRTLMDEIAVRPQQHGHPRLAIYGLIEARLQTA
DLMILGGLNEGVWPGQPAPDPWLAPRIRIAIGLPGQDRAIGMAAHDFASALGAPNALITR
ARRDATQPAIASRFWLRLQALAGEPWARGRALPLERWTRALDDPGVHEPADQPAPSPEAT
LRPKQIAVTDVDRLKADPFAFYARQILRLSPLDPVDADPSAAWRGTAVHAILEEWAREDD
CHPDKLHDRARAMLADERTHPMMRALWQPRLMQAIDWIARTIATQAEEGREVIAVERKGS
IDFAGVTLGGTFDRLDRLADGSLVVIDYKTGMPPSPAAVRAGFSLQLGLLGLIAERGGYA
GIVGQARGFEYWSLGKRNDQFGYVTSPVDPAGKNDKVLPEAFTTLAAHHFSEAVGRWLTG
GEAFTAKLHPEFAPYSEYDQLMRRDEWYGRER
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctccggcaaaccccagctctacacgatcccggcgcatcgcgcgttcgccgac
tcgctggcggcggggctgatccggcggttcggcgagcaaccgctcggcctcgcgcgcggg
ctggtgctgctgcccaacaaccgtgccaagcgcgccgtcaccgacgctttcgtgcgcgcg
agcggcggcgggctgctgttgccgcgcctcgtcgcgctgggcgatccggcgctcgatgag
gcggcgggcgcggcgctcgaccctgccgacgaggccgatccggtgccgccggcggtggcg
ccgatgcagcgccggctgatcctcgcgcggctggtcgcggcggcacgcgagcgcgctggc
cagccaaccgacgcggccgaggcggtgcggctggcgggcgatctcgcgcggacgctcgat
caactgctggtcgaggaggtgccgccgcagcgcctgcgcgagatcgatctcggcgaagag
ctttccacgcactggcaccgcgcgctcgatctgttcggactggtgctcgatcgctggccc
gccgaactggcgcggctcggctgtatcgatctcgccgaccggcgcgcgcggctgctgcgg
cggctggcggtgcgctggaaagatgcgccgccggcgggcttcgtctgcgcggccggcgtc
accgacaccgcgcccgccgtcgccgcactgctgcggcgggtggcgatgctggagcgcggc
atggtcgtgttcgcggatcttgcgaccgcgatggacgagccggagtggcaggcgctcgga
ccgcatgcgcccgatcccgtcaccggcatcatcaggcgctcgatcgagactcacccgcaa
ttccacctcaagctgctgctcgaccggatggggttcaaccgcgccgaggtgtcggtgtgg
cgcggcggcagcgagttcgatgcgacggtggcgcgcggcaaggcgatcgccagcgcgctc
gcgccggccgatttcacgggcaagtggaccgaccttcctgccgccgaacgtcgcctcgcc
ggcatcgaggccgcggaactcgccacccccggcgaggaagcgcaggcgatcgcgctggcc
ctgcggcaggcgctggaaacgcccgaacggacggcggcgctggtgacacccgatcgcgcg
ctggcgcggcgggtggcggcgcattgcaaacgctggggaatcgatatcgacgacacggcc
gggcggccgctgtcgatcctgccgtcgggaaccttgctgttggcgctcgccgatgccgcc
gcgcagcgcttcgcgccgctcgcgctgctgaccttgctcaagcatccgttggtgtgcgcg
ggcgaggggcggcgcggctggctggagggcgcgcggaagctcgatcgggtgctgcgcggg
ccgcgcccggcggcggggctggccggcgtcgactcgcatctcgccgatgctccaaagcgc
gaggcggcgcggcgcgcggctgcggcggtgtggtggccggaggcgcgcgcgctgctcgcg
ccgctggaggcggtgttcgaagccggtgcgcaaccgctcggcacgctggttgccgcgctg
cgcgagaccgcgcaggccctgtgcggtgacacgctgtggagcggccccgccggccgtgcc
gcgtccgatttcctcgcggatatagaggcgcgcgccgacgaaggcccggcgctggtcgat
cccgattcgctcgccgctttgctgcgcacgctgatggacgagatcgcggtgcggcctcag
cagcacgggcatccgcgcctcgcgatctacggcctgatcgaagcgcggctccagaccgcc
gatctgatgatcctcggcggcctcaacgaaggcgtgtggccgggccagcccgcgcccgac
ccgtggctcgcaccgcgcatccgcatcgcgatcgggctgccggggcaggatcgcgcgatc
ggcatggccgcgcatgatttcgccagcgcgctgggcgcgccgaacgcgctcatcacgcgg
gcgcggcgcgatgccacgcagccggcgatcgcatcgcgcttctggctgcggttgcaggcg
cttgccggcgagccatgggcgcggggccgcgcgctgccgctcgaacgctggacgcgggcg
ctcgacgacccgggcgttcacgaaccggccgatcagccggcgccatcgcccgaggcgacg
ctgcggcccaagcagatcgccgtcaccgatgtcgatcggctcaaggccgacccgttcgct
ttctacgcacgccagatcctgcggctttccccgctcgatccggtcgatgccgatccgagc
gcggcatggcgcggcaccgccgttcacgcgattctggaggaatgggcgcgcgaggacgat
tgccatcccgacaagctccacgaccgcgcgcgtgcgatgctggcggacgaacgcacccat
ccgatgatgcgcgctttgtggcagccgcgactgatgcaggcgatcgactggatcgcgcgc
acgatcgcgacacaggccgaggagggccgtgaagtaatcgcggtcgagcgcaagggcagc
atcgatttcgccggggtgacgctgggcggcacgttcgacaggctcgaccggctcgccgac
ggcagcctcgtcgtgatcgactacaagaccggcatgccgccatcgcccgccgccgtgcgc
gcggggttcagcctgcaactcgggctgctcgggctgatcgccgagcgcggcgggtatgcg
gggatcgtgggccaggcgcgcggtttcgaatattggtcgctcggcaagcgcaacgaccag
ttcggctatgtcacctcgccggtcgatcccgccggcaagaacgacaaggtcttgccggaa
gcgttcaccacgctcgccgcgcaccatttcagcgaggcggtcggccgctggctgaccggg
ggcgaggcgttcaccgccaagcttcaccccgaattcgcgccctatagcgagtatgaccag
ttgatgcgccgcgacgaatggtatggccgtgagcgatag
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