Sphingomonas panacis: AWL63_17680
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Entry
AWL63_17680 CDS
T04760
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
span
Sphingomonas panacis
Pathway
span03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
span00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWL63_17680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
span03400
]
AWL63_17680
Enzymes [BR:
span01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AWL63_17680
DNA repair and recombination proteins [BR:
span03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AWL63_17680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF1314
Motif
Other DBs
NCBI-ProteinID:
AOH86911
UniProt:
A0A1B3ZHM6
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All DBs
Position
3924125..3925486
Genome browser
AA seq
453 aa
AA seq
DB search
MRVIALDAEDDFDGWREGVRAAVQDHVAPERIVWRVGDQPGELFGSEAPATASAANFTVP
RAFVDLARKAILHTDRERFALLHTLLVRPGLLDDAADPLVRRVEGLAREVRRDIHKMRAF
VRFREVVEPDGARFVAWFEPDFHIVRANAGFFMDRFAAMRWSILTPEVSIHWDGATLAEG
PGATKAEAPDGDPVEAMWQSYYAAIFNPARLKVGMMLKEMPRKYWKNMPETALVPQLIAG
AQAREAGMVETARTKAGGNIEAAWAALREESMSCTRCPLHEHATQTVFGEGPVDAAMMFV
GEQPGDQEDLAGRPFVGPAGQVFDRALTEAGIDRGTIYVTNAVKHFKFEQRGKRRIHAKP
DAGEITACRWWIEQERALLRPKRTVALGATAARSLFGKAVTISRERGRALELPGGGEAWI
TVHPSYLLRLPDPVARTEEYARFVADLKSAAHT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatcgcgctcgacgcggaggacgatttcgacggctggcgcgagggtgtccgc
gctgcagttcaggatcacgtcgcgcccgagcggatcgtgtggcgcgtcggagaccagccg
ggcgaactgttcgggtcggaagcccccgcaaccgcttcggccgccaatttcacggtgccg
cgcgcttttgtcgatctcgcccgcaaagcgatcctccacaccgatcgcgaacgcttcgcg
ttgctccacacgctgctggtgcggccggggctgctcgacgatgccgccgatccgctggta
cgccgcgtcgagggtctcgcccgcgaggtccgtcgcgacatccacaagatgcgcgcgttc
gtccgctttcgcgaagtcgtcgagcccgatggcgcacgcttcgtcgcgtggttcgaaccc
gatttccacatcgtccgcgccaacgccgggtttttcatggaccggttcgcggcgatgcgc
tggtcgatcctgaccccggaggtgtcgatccattgggatggcgcgacgctcgccgagggg
ccgggtgccaccaaggccgaggcccccgatggcgatcccgtcgaagcgatgtggcagagc
tattatgccgcgatcttcaacccggcccggctgaaggtcggcatgatgctcaaggagatg
ccgcgcaaatattggaaaaacatgcccgaaaccgcgttggtgccgcagttgattgcaggc
gcacaggcgcgggaggcgggcatggtggagacggcgcggaccaaggcgggcggtaatatc
gaagcggcgtgggcggccttgcgcgaagaatcgatgagctgcacgcgctgcccgcttcac
gaacacgccacccagaccgtgtttggcgaagggccggtcgacgcagcgatgatgttcgtc
ggcgagcagccgggcgatcaggaggatctcgccggccgcccgttcgtcggccccgccggc
caagtgttcgaccgcgcgctgaccgaagccgggatcgatcgcggcaccatctacgtcacc
aacgcggtcaagcatttcaagttcgaacagcgcggcaaacgccgcatccacgccaagccc
gatgccggcgaaatcaccgcctgccgctggtggatcgagcaggagcgcgccctgctgcgg
cccaagcgaacggtcgcgctcggcgcgacggcggcgcggtcgctgttcggcaaggcggta
acgatcagccgggaacgcggccgtgcgcttgaactccccggcggcggtgaagcgtggatc
accgtccatccgagctatctgctgcgtctgcccgacccggtcgccaggaccgaggaatac
gcccgctttgtcgccgatctgaagtccgccgctcacacatag
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