Sphingomonas panacis: AWL63_17830
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Entry
AWL63_17830 CDS
T04760
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
span
Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:
span00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
span01002
]
AWL63_17830
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
span01011
]
AWL63_17830
Peptidases and inhibitors [BR:
span01002
]
Cysteine peptidases
Family C82
AWL63_17830
Peptidoglycan biosynthesis and degradation proteins [BR:
span01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AWL63_17830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AOH85518
UniProt:
A0A1B3ZDK5
LinkDB
All DBs
Position
complement(3962142..3963596)
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AA seq
484 aa
AA seq
DB search
MTSYLGGSSALALILVLSGCNSPGQTGAQQQSAAQGPAAQAGGWTDGTAAQLRKAIAGRA
AHGLDQMRFDAVGEGSGAQDAVALTRVALSYAAALARGATDPAKLYDIYTVARPNPDLKQ
GLSAALKAGDVAGWLNGLAPADANYRRLSQAYLALRRQPAAQAAGISDAGEPIKPGVADP
RLPSIAHQLVVLDYLKPEAAQGDRYTPAMVAAVKAMQADYGMEPDGVIGGEALAILNLSN
VDRARAIAVGMERLRWLERTPQPTRIDVNLAAARLSYWRDGKLVDSRKVVVGEPDKETPQ
LGSPIFRLVANPTWTIPRSIERSELAGKSGSYLRAHNMARKNGWIVQQPGPKNSLGLVKF
DMQNEHAIYLHDTPAKAMFALTQRQRSHGCVRVEDALGFAEILARDENVLDEWHKARATG
KETFVKLPRQIPVRMLYQTVLFDEKGEPIVRNDPYGWDDRVGAALGFKVGKALRVRTDQA
DVGP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcatatttggggggatcgtcagcgctggcgctgattctggtattgagtgggtgc
aattcgcccggacagaccggcgcgcagcagcaatcggcggcgcaaggtccggccgctcag
gcgggcgggtggacggacggtaccgccgctcagttgcgaaaggcgattgccggccgcgcc
gcgcacggcctcgatcagatgcggttcgatgccgtgggcgaagggagcggcgcgcaggac
gcggtcgcgctgacgcgggtggcattgagctatgccgccgcactcgcacgcggggccacc
gatcccgccaaactctatgacatttacaccgtggcgcgccccaacccggacctgaaacag
gggctgtcggccgcgttgaaagcgggggatgtcgccggctggctgaacggccttgcgcct
gcggacgccaattatcgtcgtctttcacaagcctatctcgcgttgcgccggcagccggcc
gcgcaggcggccgggatctccgacgccggcgaaccgatcaagcccggtgtcgccgatccg
cgcctgccttccatcgcgcaccagctcgtcgtcctcgattacctcaaaccagaggcagcg
cagggcgatcgctacacgcctgcgatggtcgcggcggtaaaggcgatgcaggccgattac
ggcatggaacccgacggcgtcatcggtggcgaggcactggccatcctgaacctgtcgaat
gtcgatcgcgcgcgggcgatcgcagtcggcatggagcggctgcgctggctggagcggacc
ccgcaaccgacccgcatcgacgtgaacctcgccgcggcgaggctcagctattggcgcgac
ggcaagctggtggacagccgcaaggtggtggtcggcgagcccgacaaggagacgccgcag
ctcggttcgccgatcttccggctggtcgccaacccgacctggacgatcccgcgctcgatc
gagcggagtgagctggcgggcaagagcggcagctacctgcgcgcgcacaacatggcgcgg
aagaacggctggatcgtgcagcagccggggccgaaaaactcgctcggtctggtcaagttc
gacatgcagaacgagcatgccatctacctccacgacacgccggccaaggccatgttcgcg
ctcacgcagcggcagcgcagccatggctgcgtccgcgtggaagatgcgcttggctttgcc
gaaatcctcgcacgggacgaaaacgtgctggacgaatggcacaaggcacgggcgaccgga
aaagagactttcgtgaagctgccccgccagattccggtgcggatgctctaccagacggtg
ctgttcgacgagaagggcgaaccgatcgtgcgcaacgatccttatggctgggacgaccgt
gtcggcgcggcactcgggttcaaggtggggaaggcgcttcgcgtgcggacggaccaggcg
gacgtcgggccgtaa
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