Sphingomonas panacis: AWL63_17945
Help
Entry
AWL63_17945 CDS
T04760
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
span
Sphingomonas panacis
Pathway
span03420
Nucleotide excision repair
span03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
span00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWL63_17945
03430 Mismatch repair
AWL63_17945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
span03400
]
AWL63_17945
Enzymes [BR:
span01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWL63_17945
DNA repair and recombination proteins [BR:
span03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWL63_17945
MMR (mismatch excision repair)
Other MMR factors
AWL63_17945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AOH85538
UniProt:
A0A1B3ZDN6
LinkDB
All DBs
Position
3986177..3988477
Genome browser
AA seq
766 aa
AA seq
DB search
MNIPAPAPEPAYLKGLNAPQRDAVLTTEGPVLVLAGAGTGKTAALTARLGHLLATRRAYP
SEILSVTFTNKAAREMRERVGRLVGDVVEGMPWLGTFHAIGAKMLRRHAELVGLQSNFSI
LDTDDQLRLLKQLVIAADIDEKRFPARSLAGLIDEWKNKGLVPSDIDAGESERYANGRGG
ELYQQYQTRLAALNACDFGDLLLHMLTILKRDREVLADYQRRFKYIMVDEYQDTNSVQYL
WLRLLAQERKNICCVGDDDQSIYSWRGAQVENILKFEKDFPGAKVIRLEQNYRSTPHILA
AASGVIANNSGRLGKTLWTEEADGDKVSVFGVWDGPEEARRVGEEIEAAQRNGQSLDRIA
ILVRAQHQTREFEDRFIAIGLNYRIIGGFRFYERAEIRDALAYLRVVHQSADDLAFERIV
NVPKRGLGDKAVQKLHMLARAENIPLSVAAARILDTDELTGAARKSLGNFVIDLARWRRM
ANELPHAELARQILDESGYTGALQVEKSVEAAGRLENLTELVRAMEEYESLGAFLEHVSL
VMDNEAQADEAKVTIMTIHAAKGLEYDTVFLVGWEEGLFPSQRAIDEGGNASLEEERRLA
YVAITRARRRAIILHAANRRIYGQWTSSIPSRFVGELPAAHIESENSMSGGESLWRANWS
ERADPFADVARGTGRGPGWQRAAGVKDGGAFTSRTFSREPTRVVEARASAVSLGNKGRSD
LTVGMRVFHQKFGYGAIAEIEGNKLEIDFDEAGRKRVMDTFVTLPA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccccgcgcccgcccccgaacccgcctatctcaaaggcctcaacgcgccgcag
cgcgatgccgtgctcaccactgaaggccccgttctggtgctcgccggcgcaggcaccggc
aagaccgccgcgctcaccgcccggctcggccacctactcgcgacccgccgcgcctacccg
agcgaaatcctcagcgtcaccttcaccaacaaggccgcgcgcgagatgcgcgagcgcgtc
ggccggctcgtcggcgatgtcgtcgaggggatgccgtggctcggcaccttccacgcgatc
ggcgcgaagatgctgcgccgccatgccgaactggtcgggctgcaatcgaatttctcgatt
ctcgacaccgacgatcagttgcggctcctgaagcagctcgtcatcgccgccgacatcgac
gagaagcgcttccccgcgcgcagcctcgccgggctgatcgacgaatggaagaacaagggc
ctcgtccccagcgatatcgacgcgggcgagagcgaacgctacgccaacgggcgcggcggc
gaactctaccagcaataccagactcgcctcgccgccctgaacgcctgcgatttcggcgat
ctgctgctccacatgctgaccatcctcaagcgcgaccgcgaggtgctcgccgattatcag
cgccgcttcaaatacatcatggtcgacgaatatcaggacaccaacagcgtccagtatctc
tggctccgcctgctcgcgcaggagcgcaagaacatctgctgcgtcggcgacgatgaccag
tcgatctattcgtggcgcggcgcgcaggtcgagaacatcctcaagttcgagaaggatttc
cccggcgccaaggtgatccggctcgaacaaaattaccgatcgaccccgcacatcctcgcc
gccgcgagcggcgtgatcgccaacaattcggggcggctcggcaagaccttgtggaccgag
gaagccgacggcgacaaggtcagcgtgttcggcgtgtgggacggccccgaggaagcccgc
cgcgtcggcgaggagatcgaggcggcgcaacgcaacggccagtcgctcgatcgcatcgcc
atcctcgtccgcgcgcagcatcagacgcgagagttcgaggatcgcttcatcgcgatcggc
ctgaattaccgcatcatcggcggcttccgcttctacgagcgcgccgaaatccgcgacgcg
ctcgcctatctgcgcgtcgtccaccagagcgccgacgatctcgccttcgaacgcatcgtc
aacgtccccaagcgtggcctgggcgacaaggcggtgcagaagctccacatgctcgcgcgg
gccgagaacattccgctgagcgtcgcggcggcgcgtatcctcgacaccgacgagctgacc
ggcgccgcgcgcaagtcactcggcaatttcgtgatcgatctcgcccgctggcggcgcatg
gcgaacgaactgccccacgccgaactcgcccgccagatcctcgacgagagtggctatacc
ggcgcgctccaggtcgagaaatcggtcgaggcggcggggcggctcgaaaacctcaccgaa
ctcgtccgcgctatggaggaatatgaaagcctcggcgcgttcctcgaacacgtcagcctc
gtcatggataacgaggcgcaggccgacgaggccaaggtgacgatcatgacgatccacgcc
gccaagggcctcgaatatgacaccgtcttcctggtcggctgggaagaaggcctgttcccc
tcgcaacgcgcgatcgacgaaggcggcaacgcgtcgctggaggaggaacgccgcctcgcc
tacgtggcgatcacgcgcgcgaggcgccgcgcgatcatcctccacgccgccaaccgccgc
atctacggccaatggaccagcagcatcccaagccgcttcgtcggcgaactcccggccgcg
cacatcgagagcgaaaacagcatgagcggcggcgaaagcctgtggcgcgccaactggtcg
gaacgcgccgacccgttcgccgacgtcgcgcgcggcaccggccgcggccccggctggcaa
cgcgcggccggggtgaaagacggcggcgccttcaccagccgcacgttctcccgcgaacca
acgcgcgtcgtggaagcgcgcgccagtgcggtgagtttggggaacaagggccgcagcgat
ctgacggtggggatgcgcgtgttccaccagaaattcggctacggcgcgatcgccgagatc
gaggggaataagctggaaatcgacttcgacgaggccgggcgcaagcgggtgatggatacg
tttgttacgctgccggcgtga
DBGET
integrated database retrieval system
