Sphingomonas panacis: AWL63_18645
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Entry
AWL63_18645 CDS
T04760
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
span
Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:
span00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
span03032
]
AWL63_18645
03036 Chromosome and associated proteins [BR:
span03036
]
AWL63_18645
03400 DNA repair and recombination proteins [BR:
span03400
]
AWL63_18645
DNA replication proteins [BR:
span03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AWL63_18645
Chromosome and associated proteins [BR:
span03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AWL63_18645
DNA repair and recombination proteins [BR:
span03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AWL63_18645
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AOH85656
UniProt:
A0A1B3ZE06
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All DBs
Position
4131589..4131858
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AA seq
89 aa
AA seq
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MNIGELAKGAAAAMSTSEANAKSAITAVFDQIAAAAAKGEEIAIPGFGKFSVRDRPERQG
RNPATGEAMTIAASKKVSFAAAKGLKDKL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcggtgaactggcaaaaggtgccgctgcggcgatgagcacaagcgaagcgaac
gccaagtctgcgataacggccgtgttcgatcagattgccgctgcggccgccaagggcgaa
gaaatagcgatccccggcttcggcaagttttccgtcagggatcgacccgagcgtcagggc
cgcaatccggcgactggtgaggcgatgaccatcgcggcgtcgaagaaggtgtcgttcgcc
gccgcaaaggggctaaaagacaagctctga
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