Sphingomonas panacis: AWL63_19260
Help
Entry
AWL63_19260 CDS
T04760
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
span
Sphingomonas panacis
Brite
KEGG Orthology (KO) [BR:
span00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
span03032
]
AWL63_19260
03036 Chromosome and associated proteins [BR:
span03036
]
AWL63_19260
03400 DNA repair and recombination proteins [BR:
span03400
]
AWL63_19260
DNA replication proteins [BR:
span03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AWL63_19260
Chromosome and associated proteins [BR:
span03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AWL63_19260
DNA repair and recombination proteins [BR:
span03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AWL63_19260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
SSPI
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AOH85768
UniProt:
A0A1B3ZEA7
LinkDB
All DBs
Position
4245118..4245393
Genome browser
AA seq
91 aa
AA seq
DB search
MNNSDIAEAVATSHGIAKTEAKKLVDAVFATIADGVAKGEEVSLPGFGKFKVKDQPERQG
RNPSTGEAITIAASKKLGFTPAKAVKDRLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataattccgatatcgcagaggcggttgccaccagtcacggcattgcaaagaccgag
gcgaagaagctcgttgatgcagtgttcgcgacgatcgcagacggcgtcgcaaagggcgaa
gaggtttcgctgcccggcttcggcaaattcaaggtcaaggatcagcctgagcgccagggc
cgcaatccctcaaccggtgaagcgatcacgatcgcggcgtccaagaagctcgggttcacg
cctgccaaggcggtgaaggaccgcctgaacggctag
DBGET
integrated database retrieval system
