KEGG   Sphingomonas panacis: AWL63_21640
Entry
AWL63_21640       CDS       T04760                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
span  Sphingomonas panacis
Pathway
span03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:span00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AWL63_21640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:span03019]
    AWL63_21640
Messenger RNA biogenesis [BR:span03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AWL63_21640
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL RNase_J_C Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: AOH87005
UniProt: A0A1B3ZHV6
LinkDB
Position
complement(4740495..4742072)
AA seq 525 aa
MNVNLYGCQGKWLMVDCGITFADPNYPGIELILPDLQFIEERLDDLVGIVLTHGHEDHIG
ALPYLAEDLGVPIYATAFTAGLIRGKLEEEGNVKRVALNVVDPSKTLQLGPFGIDFVPLS
HSIPEMNALSIATPYGRVFHTGDWKLDTAPVIGKPAAPEALAAIGDKGVLALVCDSTNVF
NTEPSGSEADVRVGLTEVIDKARGRVLVTTFASNAARLHTLGQVAKETGRALCVAGRSLD
RIIKVAKATGYLRDLPATIDPEAAMRLPRDKVMIVATGGQGEDRAALSRVAFGSHPIKLD
AGDTVVFSSKQIPGNEVAIGRIQNQLAAKGIVMVTDRQAHVHVSGHPGRPELAQMYGWLR
PKILMPVHGEMRHLMEQARFGLTQGVPQTLVQTNGEIVRLAPGAPEKIGHAPIGRLVLDG
DVILPGDGGTINERRKLAVNGQMSVAVAIGGRGLIGRPQVRYNGIPVEEDRAPFIEETVD
AVIAATKQPPKDREKLREAIRLAARRVATRWTGKKPIVDVLLIEA
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgaacgtcaatttgtacggatgccagggcaaatggctgatggtcgattgcggcatcacc
tttgccgatcccaattatcccggcatcgagctgatcctgcccgatctccagttcatcgag
gaacggctggatgatctcgttggcatcgtgctcacgcacgggcatgaggatcatatcggc
gccttgccctatctcgccgaagatctcggcgtgccgatctacgcgaccgccttcacggcg
gggctgatccgcggcaagttggaagaggaaggcaacgtcaagcgcgtcgcgctcaatgtc
gtcgatccgtccaagacgctccagctcgggccgttcggaatcgatttcgtaccgctgtcg
cactcgattcccgagatgaacgcgctgtcgatcgcaacgccctatggccgcgtgttccac
accggtgactggaagctcgataccgcgccggtgatcggcaagccagccgcgcccgaggcg
ctcgccgcgatcggcgacaaaggcgtgctcgcgctggtgtgcgattcgaccaatgtgttc
aacaccgaaccctcggggtccgaggcggatgtacgtgtcggccttaccgaggtgatcgac
aaggcgcgcggacgcgtgctggtgacgaccttcgcatcgaatgcggcacggctgcacacg
ctcggtcaggtcgccaaggaaaccggccgcgccttgtgcgttgccggccgctcgctcgac
cgcatcatcaaggtcgccaaggcgaccggttatctccgggatctgccggcgacgatcgat
cccgaagcggcgatgcggctaccgcgcgacaaggtgatgatcgtcgccaccggcgggcag
ggcgaggatcgcgctgcgctgtcgcgagtcgcattcggcagccacccgatcaagctcgat
gccggcgataccgtcgtgttctcgtcgaagcagattccgggcaacgaggtcgcgatcggc
cgcatccagaaccagctcgccgccaagggcatcgtgatggttacggatcggcaggcgcac
gtccatgtttccgggcacccgggtcggcccgaactggcgcagatgtacggctggcttcgc
cccaagatcctgatgccggtccacggcgagatgcgacacctgatggagcaggcgcggttc
ggtctgacgcagggcgtgccgcagacgttggtgcagaccaacggcgagatcgtccggctt
gcgccgggcgcgcccgagaagatcggccacgcgccaatagggcggctggtgctcgacggt
gacgttatcctgcccggcgacggcgggacgatcaatgagcggcgtaagctcgccgtcaac
ggccagatgtcggtcgcggtggcgatcggcggtcgcgggctgatcggccggccgcaggtg
cgctacaacggcatcccggtcgaggaggatcgtgcgccgttcatcgaggaaaccgtcgac
gcggtgatcgccgcgaccaaacagccgcccaaggatcgcgagaagctgcgcgaggcgatc
cgcctcgccgcacgccgcgtcgcgacgcgctggaccggcaagaagccgatcgtcgacgtg
ctgctgatcgaggcgtaa

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