Sphingomonas panacis: AWL63_22285
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Entry
AWL63_22285 CDS
T04760
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
span
Sphingomonas panacis
Pathway
span03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
span00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWL63_22285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
span03021
]
AWL63_22285
03400 DNA repair and recombination proteins [BR:
span03400
]
AWL63_22285
Enzymes [BR:
span01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWL63_22285
Transcription machinery [BR:
span03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWL63_22285
DNA repair and recombination proteins [BR:
span03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWL63_22285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
AOH86278
UniProt:
A0A1B3ZFS9
LinkDB
All DBs
Position
complement(4873846..4874910)
Genome browser
AA seq
354 aa
AA seq
DB search
MSVNAKNWQELKKPNGLEVKPGGDAKRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALRMQGEGPKRLQLSATGPTTVTAGDI
AVTGDIEVMNPKLVLCHLDDGATLNMELTADVGKGYVAAVANRPADAPIGLIPVDALYSP
VRQVSYKVENTRVGQELDYDKLTLTVETDGTVTPEDAVGYAGRILQDQLALFVHFDDSAM
TRSAPTGVAAPAATSEVSGDTQQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMEIPGWPPENIEEMAKKLEQEIMG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtcaatgctaagaactggcaggaattgaagaagcccaacggcctcgaagtgaag
ccgggcggcgatgccaagcgcaaggcgacctttgttgccgaaccgctcgagcgtggcttc
ggcctgacgctcggcaacgcgctgcgtcgcgtgctgctgtcgtcgctccagggtgccgcc
gtcacctcgatcaagatcgagaacgtcctgcacgaattctcctcgctcgccggcgtgcgc
gaggacgtgaccgacatcgtcctcaacgtgaagcagatcgcgcttcgcatgcagggtgag
gggccgaagcgcctccagctctcggcgaccggtccgacgaccgtcacggcgggcgacatc
gcggttacgggcgacatcgaggtgatgaaccccaagctcgtgctgtgccatctcgacgac
ggcgcgacgctcaacatggaactcaccgccgatgtcggtaagggctatgtcgcggcggtc
gcaaaccgtccggcggatgcgccgatcgggctgatcccggttgacgcattgtattcgccg
gtgcgtcaggtgtcgtacaaggtcgagaacacccgcgttgggcaggaactcgattacgac
aagctcacgctgacggtggagaccgacggcaccgtcactcccgaggacgcggtcggctat
gccgggcgcattctgcaggaccagttggcgctgttcgtccacttcgacgattcggcgatg
acccgttcggcaccgaccggcgttgcggccccggctgcgaccagcgaggtttcgggcgat
acccagcagatcaaccgctacctgctcaagaaggtcgacgagctcgaactgtcggtccgt
tcggccaactgcctcaagaacgacaacatcatctacatcggcgatctggtccagaagacc
gaagccgagatgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaa
gtgctttcgtcgatgggtctccgtctcggtatggaaatccccggctggccgcccgagaac
atcgaagagatggcgaagaagctcgagcaggaaatcatgggctaa
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