Saccharomyces paradoxus: SPAR_B00310
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Entry
SPAR_B00310 CDS
T08193
Name
(RefSeq) Nup170
KO
K14312
nuclear pore complex protein Nup155
Organism
spao
Saccharomyces paradoxus
Pathway
spao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPAR_B00310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_B00310
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPAR_B00310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
54628715
NCBI-ProteinID:
XP_033764524
LinkDB
All DBs
Position
II:<95065..>99585
Genome browser
AA seq
1506 aa
AA seq
DB search
MFQSFFHNNGPAAAGETFSDSRSYPLTNHHEVPRNGLNGLNESASSAAKLQQQQPTQILS
SYPIAGSNPLMRAGAMGATSGSINPNMSNMNEHIRVSGMGTSKPLDLAGKYIDHLQHKDS
NTPVLDERSYYNSGVDYNFSREKNGLGAFTPFEKQDVFDIPDEILHEFSTSQTRADMGIF
PELNRCWITIDNKLILWNINNDNEYQVIDDMKHTIRKVALVRPKPNTFVPAVKHLLLICT
TMEIFMFAISLDKATNELNVFNTHLSVPVQGIDIIDIVSHERSGRIFFAGQGSGLNIWEL
QYSGSDDWFNSKCSKVCLTKSALLSLLPTNMLSQIPGVDFVQALFEDNSNGSGGYSQETI
TQLTIDQQRGIIYSLSSKSTIKAYVITEKSLEGPMSIEPAYISRIIGTTTARAAPILGHK
YLKIVKISSVAPEENNNLFLVALTVGGVRLYFNGSMGRFNIEALRLESIKFPPSSVTPEV
IQQELLHQQQEQAKRSFPFFSNIMSSEPVLLKFQKKSSVLLETTKASTIISPGIFFSAVI
KSSQQTHQADKKESSSTAGTTATTGSKTANQPPVTLQHKLFVSVPDYGILKTHGKYVENA
TFLETTGPVQQIIPLSGLFNATTKPQGFANEFATQYTSETLRVAVLTNASVEIYKYRTPD
EIFEDLIDNPLPFVLNYGTAEACSTALFVTCKSNKSEKLRSNALTFLTMGIPGVVDIKPV
YNRYSVSTVSSLLSKPSLSTTTTNLQQSLAGYSKPSPANKEDFDLDDVILSPRFYGIALL
ITRLLRDIWGRHVFMTFTENGTTPHTFNSPFISLTSSINNQKGDDISQNSNIISKVSISK
DCIEYYLSSVNILNEFFITYGDSISQISAPYVLANNSNGRVIDKTEEVANQAESIAINAL
IKLVQSIKEGLSFLNVLYEESEVEGFDNQYLGFKDIISFVSLDVQKDLVKLDFKDLFAPN
DKTKSLIREILLSIINRNITKGASIEYTATALQERCGSFCSASDILGFRAIEHLRRAKEI
GLRNYDSLNYHLKNATALLEQIVDDLSIEKLKEAVSMMLSVNYYPKSIEFLLNIANSMDK
GKLACQYVANGFLENDERKQYYDKRISVYDLVFETLIKVDELAEKKPSSNTQNQVSISND
DEAKLREKSYEVALKYNDKLFHYHMYDWLVSQNREEKLLDMETPFILPYLMEKAGSSLKI
SNILWVYYSRRSKFFESAEILYRLATSNFDITLFERIEFLSRANGFCNSVSPLSQKQRIV
QLASRIQDACEVAGIQGDILSLVYTDVRIDPTIKDELIRTLDGKILSTSELFNDFAVPLS
YHEIALFIFKIADFRDHEMIMAKWDELFQSLRMEFNNTGKKEDSMNFINLLSNVLIKIGK
NVQDSEFIFPIFELFPIVCNFFYETLPKEHIVSGSIVSIFITAGVSFNKMYYILKELIET
SDSDNSVFNKEMTWLIHEWYKSERKFRDIITYNDIIHLKEYNIDNDPIEKYVRNTGNNLG
IYFYKE
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaagttttttccacaacaatgggcccgctgctgccggtgaaacgttttcagat
agcagatcgtaccctttaacgaatcatcatgaagtgcctcggaatggattgaatggatta
aatgagtctgcttcttctgcagccaaactacagcaacagcaacctacacaaatattaagc
tcatatccaattgccggttccaatccgcttatgagggcgggcgccatgggggcgacttcg
ggcagcatcaatcctaatatgtccaacatgaatgagcatattcgtgtttccgggatggga
acttccaagcccctggatttggcagggaagtacattgatcatctacaacataaagatagt
aacactccggtacttgatgaaagatcttattataatagcggggtagattataactttagc
agagagaaaaatggtttaggagcgtttactccctttgaaaagcaagacgtgttcgatatt
ccggacgagattttgcatgaattttcgacttcacagacaagggctgatatgggtattttc
ccagagttaaatcgatgttggataactatcgataataaactgatactctggaatattaac
aatgataacgagtaccaggtgatagatgatatgaagcataccattcggaaagtcgccttg
gtaagacctaagccaaacacgttcgtgcctgccgtgaaacatctccttttgatatgcacg
acaatggagattttcatgtttgctatttccttagacaaagccacaaacgaactcaatgta
ttcaatacgcatttgtctgtccccgtgcaaggcattgatataatagacattgtgtctcat
gaaagatcgggtagaattttcttcgctggccaaggcagtggtctgaatatctgggaattg
cagtattcaggctccgacgactggttcaatagcaaatgtagcaaagtttgcctgacaaag
tccgctctattaagtcttcttcctactaacatgctttcccagattccaggtgttgatttt
gttcaggcgttgttcgaagataattctaacggtagcggtggatattcgcaagagactatc
acacaactaactatcgaccaacaaagaggcataatttattcattatcttccaagtccacc
atcaaagcatacgtaataacagaaaaatcgctggaaggacccatgtccatcgagcctgcc
tacatcagtagaataataggtaccacgacagcaagggccgcgccaattttgggccacaaa
tacctgaaaattgttaagataagctctgtcgcacccgaagaaaacaacaacctgtttttg
gttgctctaacagtaggtggtgtgcgcttgtactttaatggttctatgggcaggttcaac
atcgaagctttgaggctagaatcaatcaagtttcccccaagttctgtaactcctgaagtc
atccaacaagaattactacatcaacaacaagagcaagcgaagagaagctttccttttttt
tcgaatataatgtcttccgaaccagtcctcttgaaattccaaaagaaatcatctgtatta
ctagagactacaaaagcaagtacaattatttccccgggcatatttttttccgccgtgatc
aaatcatcccaacaaacgcatcaggcagataaaaaagaaagctcgtccaccgctggaaca
acggctaccactggttctaaaactgccaaccagccaccagttactttacaacacaagctt
ttcgttagtgttccagattatggtatcttgaaaacacacggtaagtatgttgaaaatgct
acgttcttggaaactaccggcccagtccaacaaattatcccattatcagggcttttcaat
gcaacgacaaagccacaaggatttgctaatgaatttgcaacacaatacacatcagagacc
ttaagagtagcagttttgacgaacgcttctgtcgaaatctataaataccgtactcctgac
gaaatatttgaagatttaatcgataatccactgccattcgtgttaaattatggtaccgca
gaagcttgttcgaccgcgttgtttgttacttgcaaatcaaacaaatctgaaaaattaaga
tctaatgccctaacttttttaacgatgggtattcccggcgtcgtcgacattaaacctgtc
tacaaccgttattccgtatctacagtatcctctttattatcaaagcccagtttatctact
acaacaacgaatcttcaacaatcattggccggttatagcaaaccctcccccgcaaataag
gaagatttcgatttggatgatgtaatattatcccccagattttacggtatcgcattatta
attacaagacttctccgggatatttgggggaggcacgtcttcatgactttcacagaaaat
gggacgacaccccatactttcaattcaccttttatttcactcacctcatctataaataac
caaaaaggagatgacatttcacagaatagtaacataatatcgaaagtttctatttccaag
gattgtatcgagtactatttatcttcagttaacattttaaatgaatttttcattacttat
ggtgattctatttctcaaatatcagctccctacgtattagcgaacaattctaatggtagg
gttattgataaaacggaagaagttgcaaaccaagcagaaagtatagccattaatgctttg
atcaaattggtgcaatccataaaagaaggtctgtcattcttaaatgtgttatatgaagaa
agcgaagttgaaggattcgacaaccaataccttggttttaaggatataatcagttttgta
agcttagatgtccaaaaagatttggtcaaactagactttaaagatctatttgctccaaat
gacaaaacaaaatcattaattagagagattttgttatccatcattaacagaaatatcacc
aaaggtgcatccatagagtatactgcaacagctttacaagaacgctgcgggtctttctgt
tctgcaagcgatatattaggatttagggctattgaacatctcagaagggctaaagaaatt
ggcttgcgcaattacgattcattaaactatcacctgaaaaatgctactgccctgcttgaa
caaattgtggatgatctttctattgaaaaattgaaagaagctgtatcgatgatgctgagt
gtaaattattacccaaaatctattgaatttttattgaatattgccaactctatggacaaa
ggaaaattagcttgtcaatatgtggcaaatggatttttagaaaatgatgaaagaaagcag
tattatgataaacgtatttcagtttatgacttggtttttgagactttaataaaagtcgac
gaacttgcagaaaaaaaaccatcgtccaacactcaaaaccaagtttcaatatctaatgac
gatgaagcaaaactgagagagaaaagttacgaagtcgctctaaagtataatgataaatta
tttcactatcatatgtatgattggctcgtttctcaaaacagagaagagaaactactagat
atggaaactccattcatactcccttatttaatggaaaaggcaggtagctcattaaaaata
tctaatattctatgggtttattattcaagaagatctaaatttttcgaatctgctgaaatt
ctttaccgtttagccacatcgaattttgacatcacactctttgaaagaattgagtttctt
tcacgcgctaatggattttgcaacagtgtgtccccactaagccagaaacagagaattgta
caactagctagcagaatccaagatgcatgtgaagttgctggtattcaaggtgatatatta
tcacttgtgtatacagacgtaagaatagatcccactattaaagatgagttgattaggact
ttagatggtaaaatattaagcacaagtgagctgttcaatgattttgctgtacccttaagt
taccatgaaattgctctattcattttcaagatagcagattttagggatcatgaaatgatt
atggccaagtgggatgaactattccaatctttgaggatggaatttaataataccggtaag
aaagaagattcaatgaatttcatcaacttactgtctaatgtattaattaaaattggtaaa
aatgtccaagattctgagtttattttccccattttcgaactatttcccatagtttgtaat
tttttctatgaaacactacctaaggagcatatcgtatcaggatcgatagtttccatcttc
ataacagcgggtgtttctttcaacaaaatgtactatattttaaaagaactaatcgagaca
tcagactccgataattccgtattcaataaagaaatgacttggttaatacacgaatggtat
aagtcggaaaggaaatttagagatattatcacctacaatgatatcattcacttgaaggaa
tacaatattgataatgatccaattgaaaaatacgttaggaacactggcaacaatttgggc
atttatttctacaaagaataa
DBGET
integrated database retrieval system
