KEGG   Saccharomyces paradoxus: SPAR_B00800
Entry
SPAR_B00800       CDS       T08193                                 
Name
(RefSeq) Lsm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
spao  Saccharomyces paradoxus
Pathway
spao03018  RNA degradation
spao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAR_B00800
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPAR_B00800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spao03019]
    SPAR_B00800
   03041 Spliceosome [BR:spao03041]
    SPAR_B00800
Messenger RNA biogenesis [BR:spao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPAR_B00800
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SPAR_B00800
Spliceosome [BR:spao03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SPAR_B00800
 Complex C
  U2 snRNP components
    SPAR_B00800
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 54628764
NCBI-ProteinID: XP_033764573
UniProt: A0A8B8ULE0
LinkDB
Position
II:190686..191104
AA seq 95 aa
MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNI
FIRGSTVRYVYLNKNMVDTNLLQDATRREVMTERK
NT seq 288 nt   +upstreamnt  +downstreamnt
atgcttttcttctcttttttcaagactttagttgaccaagaagtggtcgtagagttaaaa
aatgacatcgaaataaaaggtaccctacaatctgtcgaccaatttttgaacctaaaacta
gacaacatatcatgcacagatgaaaaaaaatatccgcacttaggttccgtaaggaatatc
tttataagaggttccacagtcaggtacgtctatttgaataagaatatggtagatacgaat
ttactgcaagacgctaccagaagggaggtaatgactgaaagaaaataa

DBGET integrated database retrieval system