KEGG   Saccharomyces paradoxus: SPAR_B01910
Entry
SPAR_B01910       CDS       T08193                                 
Name
(RefSeq) Rfc5
  KO
K10756  replication factor C subunit 3/5
Organism
spao  Saccharomyces paradoxus
Pathway
spao03030  DNA replication
spao03410  Base excision repair
spao03420  Nucleotide excision repair
spao03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SPAR_B01910
   03410 Base excision repair
    SPAR_B01910
   03420 Nucleotide excision repair
    SPAR_B01910
   03430 Mismatch repair
    SPAR_B01910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spao03032]
    SPAR_B01910
   03036 Chromosome and associated proteins [BR:spao03036]
    SPAR_B01910
   03400 DNA repair and recombination proteins [BR:spao03400]
    SPAR_B01910
DNA replication proteins [BR:spao03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SPAR_B01910
  DNA Replication Termination Factors
   ELG1-RFC complex
    SPAR_B01910
Chromosome and associated proteins [BR:spao03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SPAR_B01910
DNA repair and recombination proteins [BR:spao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SPAR_B01910
  Check point factors
   HRAD17(Rad24)-RFC complex
    SPAR_B01910
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA AAA_22 AAA_16 Rad17 NYD-SP12_N AAA_assoc_2 Rep_fac_C Anamorsin_N
Other DBs
NCBI-GeneID: 54628875
NCBI-ProteinID: XP_033764684
UniProt: A0A8B8ULN5
LinkDB
Position
II:433735..434799
AA seq 354 aa
MSLWVDKYRPKSLNALSHNEGLTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI
FGSGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME
QVDFQDSRDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMICDSMSPIIAP
IKSRCLLVRCPAPCNNEISTILSDVVTNERIQLETKDILQRIAHESNGNLRVSLLMLESM
ALNNELTLKSSSPIIKPDWIIVIQKLTRKIVKERSVNSLVECRAVLYDLLAHCIPANIIL
KELTFSLLDVETLSTMNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCSLD
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgtcactgtgggtagataaatataggcctaagtctttgaacgcactttcacataatgaa
gggttgacaaatttcctgaaatcgttatctgatcaacctcgtgatttacctcacctttta
ctgtatggaccaaatggtacaggtaagaaaacacgttgtatggcattattagagtccata
ttcggatccggagtctacaggttaaaaattgatgtcagacagttcgtcactgcctcgaac
agaaaactagaactgaatgtggttagttcaccgtaccacttagagatcacgccaagtgat
atgggtaacaatgatagaattgtcattcaagaactattgaaagaagtagctcaaatggaa
caagtagactttcaagattctagagacggattggcccatagatataaatgtgttattatc
aacgaggcgaactcgttaacaaaggatgctcaagctgccttaagacgtactatggaaaag
tattccaagaacattaggttgataatgatctgcgattccatgtctcctataatcgctccc
atcaagtcacgttgtctgttggtccgttgtcctgcaccatgtaataacgaaatttcaacg
attttgtctgatgtggtaacgaatgaaaggatacagctagaaacaaaggatattctacaa
agaattgcccatgaatcaaatggcaatttgcgggtctcgctactaatgcttgaatccatg
gcattaaacaacgaactaacattgaaaagcagtagccccataataaaaccggattggatt
atagtgatccaaaaactaacgaggaaaatcgttaaagagagatctgttaattctttagtc
gaatgtagagctgtcctatacgatttattagctcattgcatacctgctaatattattttg
aaggaactaacgttctcattattggatgtggaaaccctgagtaccatgaataaatcgtcc
atcattgaatattccagcgttttcgacgaaagattatcacttggaaacaaggcaatattt
catttggaagggttcatagcaaaagttatgtgctccttagattaa

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