Saccharomyces paradoxus: SPAR_B02940
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Entry
SPAR_B02940 CDS
T08193
Name
(RefSeq) Msi1
KO
K10752
histone-binding protein RBBP4
Organism
spao
Saccharomyces paradoxus
Pathway
spao03082
ATP-dependent chromatin remodeling
spao03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SPAR_B02940
03083 Polycomb repressive complex
SPAR_B02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spao03036
]
SPAR_B02940
Chromosome and associated proteins [BR:
spao03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
SPAR_B02940
Histone modification proteins
HAT complexes
HATB complex
SPAR_B02940
HDAC complexes
Sin3A-HDAC complex
SPAR_B02940
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
SPAR_B02940
PRC2.2
SPAR_B02940
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
SPAR_B02940
Heterochromatin formation proteins
Other heterochromatin formation proteins
SPAR_B02940
Chromatin remodeling factors
NuRD complex
SPAR_B02940
NuRF complex
SPAR_B02940
NuRF complex (fruit fly)
SPAR_B02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
MIOS_WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
eIF2A
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR11_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
54628978
NCBI-ProteinID:
XP_033764787
UniProt:
A0A8B8ULZ9
LinkDB
All DBs
Position
II:complement(625585..626853)
Genome browser
AA seq
422 aa
AA seq
DB search
MNKCVEDTTNEASNIPIDLQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSD
EHRILLSSFTSSQKPEDETIYISRISTLGHIKWSSLNNFDTDEMEFKPENSTRYPSKHLV
NDISIFFPNGECNRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKL
FGSHDVIQDVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPII
DLPLASINSDGSAVNDVTWMPTHDSLFAACTEGNAVSLFDLRTKKEKLKSNCKKHDGGVN
SCKFNYKNSLILASADSKGRINLWDIRNMNESPITTMEHGASVSTLEWSPNFDTVLATAG
QEDGLVKLWDTSCEETMFTHGGHMLGVNDISWDVHDPWLMCSVANDNSVHIWKPAENLVG
YS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtgcgtggaggacacaactaatgaagcctccaatatccctatcgatttgcaa
gaaagatactcgcattggaagaaaaacactaaactactttatgattacctaaacacaaac
tcaacgaagtggccgtccttaacgtgccagttctttcctgatttggataccacttcggat
gagcaccgcatcttgttatcctcttttacatcttcccaaaaacctgaggatgagaccata
tatattagcagaatatccactctaggccatataaaatggtcatctttgaataatttcgat
acggacgagatggagttcaaaccggagaactcaacgaggtatccctccaaacatttagtg
aacgatatcagtattttctttccaaacggggaatgcaatagggcaagatatttgcctcaa
aatccagatattatagccggggcctcttcggatggtgcaatctacatattcgatagaacg
aaacacggctctactaggataagacagtccaaaatttcacatcccttcgagaccaaacta
ttcggttcacacgatgttatccaagatgtggaggcgatggatacttcttcggcagatata
aatgaggccacatcattggcctggaacttacaacaggaggcgcttttactatcttctcac
tccaacggccaagtacaagtttgggacattaaacaatattcgcacgaaaaccccataata
gatttacccttggcctcaataaacagcgatggaagcgcggtgaacgatgtgacttggatg
ccaacacacgattccctattcgctgcttgtactgaggggaatgccgtttcactattcgat
ctaagaactaagaaagagaaactaaagagtaactgtaaaaaacacgatggcggtgtgaac
tcttgtaagtttaactataagaactctttaatcttagcatctgccgattcaaaaggcagg
ataaatttatgggatattagaaacatgaatgaaagcccaatcactaccatggagcatggt
gcttccgtttcgactttggaatggagtccaaatttcgatactgtattggcaacagctggt
caagaggatgggttagttaagctatgggacacttcctgtgaagaaactatgtttacacat
ggtggtcacatgctcggtgtgaacgacatctcgtgggacgtccatgacccttggttaatg
tgcagtgtggcaaacgataactcagttcacatatggaaacccgcagaaaatcttgtggga
tattcgtga
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