KEGG   Saccharomyces paradoxus: SPAR_B02940
Entry
SPAR_B02940       CDS       T08193                                 
Name
(RefSeq) Msi1
  KO
K10752  histone-binding protein RBBP4
Organism
spao  Saccharomyces paradoxus
Pathway
spao03082  ATP-dependent chromatin remodeling
spao03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SPAR_B02940
   03083 Polycomb repressive complex
    SPAR_B02940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spao03036]
    SPAR_B02940
Chromosome and associated proteins [BR:spao03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     SPAR_B02940
  Histone modification proteins
   HAT complexes
    HATB complex
     SPAR_B02940
   HDAC complexes
    Sin3A-HDAC complex
     SPAR_B02940
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     SPAR_B02940
    PRC2.2
     SPAR_B02940
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     SPAR_B02940
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SPAR_B02940
  Chromatin remodeling factors
   NuRD complex
    SPAR_B02940
   NuRF complex
    SPAR_B02940
   NuRF complex (fruit fly)
    SPAR_B02940
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I MIOS_WD40 ANAPC4_WD40 Beta-prop_WDR19_1st eIF2A Beta-prop_EML Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR11_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 54628978
NCBI-ProteinID: XP_033764787
UniProt: A0A8B8ULZ9
LinkDB
Position
II:complement(625585..626853)
AA seq 422 aa
MNKCVEDTTNEASNIPIDLQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSD
EHRILLSSFTSSQKPEDETIYISRISTLGHIKWSSLNNFDTDEMEFKPENSTRYPSKHLV
NDISIFFPNGECNRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKL
FGSHDVIQDVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPII
DLPLASINSDGSAVNDVTWMPTHDSLFAACTEGNAVSLFDLRTKKEKLKSNCKKHDGGVN
SCKFNYKNSLILASADSKGRINLWDIRNMNESPITTMEHGASVSTLEWSPNFDTVLATAG
QEDGLVKLWDTSCEETMFTHGGHMLGVNDISWDVHDPWLMCSVANDNSVHIWKPAENLVG
YS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaataagtgcgtggaggacacaactaatgaagcctccaatatccctatcgatttgcaa
gaaagatactcgcattggaagaaaaacactaaactactttatgattacctaaacacaaac
tcaacgaagtggccgtccttaacgtgccagttctttcctgatttggataccacttcggat
gagcaccgcatcttgttatcctcttttacatcttcccaaaaacctgaggatgagaccata
tatattagcagaatatccactctaggccatataaaatggtcatctttgaataatttcgat
acggacgagatggagttcaaaccggagaactcaacgaggtatccctccaaacatttagtg
aacgatatcagtattttctttccaaacggggaatgcaatagggcaagatatttgcctcaa
aatccagatattatagccggggcctcttcggatggtgcaatctacatattcgatagaacg
aaacacggctctactaggataagacagtccaaaatttcacatcccttcgagaccaaacta
ttcggttcacacgatgttatccaagatgtggaggcgatggatacttcttcggcagatata
aatgaggccacatcattggcctggaacttacaacaggaggcgcttttactatcttctcac
tccaacggccaagtacaagtttgggacattaaacaatattcgcacgaaaaccccataata
gatttacccttggcctcaataaacagcgatggaagcgcggtgaacgatgtgacttggatg
ccaacacacgattccctattcgctgcttgtactgaggggaatgccgtttcactattcgat
ctaagaactaagaaagagaaactaaagagtaactgtaaaaaacacgatggcggtgtgaac
tcttgtaagtttaactataagaactctttaatcttagcatctgccgattcaaaaggcagg
ataaatttatgggatattagaaacatgaatgaaagcccaatcactaccatggagcatggt
gcttccgtttcgactttggaatggagtccaaatttcgatactgtattggcaacagctggt
caagaggatgggttagttaagctatgggacacttcctgtgaagaaactatgtttacacat
ggtggtcacatgctcggtgtgaacgacatctcgtgggacgtccatgacccttggttaatg
tgcagtgtggcaaacgataactcagttcacatatggaaacccgcagaaaatcttgtggga
tattcgtga

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