Saccharomyces paradoxus: SPAR_D00770
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Entry
SPAR_D00770 CDS
T08193
Name
(RefSeq) Cdc36
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
spao
Saccharomyces paradoxus
Pathway
spao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAR_D00770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_D00770
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SPAR_D00770
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SPAR_D00770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
54629324
NCBI-ProteinID:
XP_033765110
UniProt:
A0A8B8UMV0
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All DBs
Position
IV:<165493..>166068
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AA seq
191 aa
AA seq
DB search
MENFGLKALVPLLKLEDKELSSTYDHSMTLGADLSSMLYSLGIPRDSQDHRVLDTFQSPW
AETSRSEVEPRFFTPESFTNIPGVLQSNVTPPCFNSIQNDQQRVALFQDETLFFLFYKHP
GTVIQELTYLELRKRNWRYHKTLKAWLTKDPMMEPIVSADGLSERGSYVFFDPQRWEKCQ
RDFLLFYNAIM
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttggattaaaagcactcgtaccgctgcttaaactagaggacaaagaactc
tcaagcacatacgaccattccatgactttaggagcggacttatcgtcaatgctatattct
ttgggtattccaagagattcacaagatcatagggttctcgatacttttcaatcaccatgg
gcagaaacatctagaagcgaggtagagccccgatttttcacaccggaatctttcaccaac
atccccggcgtattacagtccaatgtaaccccaccatgtttcaattccatacaaaatgat
caacagcgtgttgcccttttccaagatgaaactctattttttcttttctataaacaccca
ggtacagtcatccaagagcttacgtatttggagctcaggaaaagaaattggaggtatcac
aagacgttaaaggcctggctcaccaaggaccctatgatggaacctattgtatccgccgat
ggcctaagtgaaagggggtcatacgtattttttgacccacaaaggtgggaaaagtgccaa
agggatttcttattgttttataatgctattatgtaa
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