KEGG   Saccharomyces paradoxus: SPAR_D00810
Entry
SPAR_D00810       CDS       T08193                                 
Name
(RefSeq) Dhh1
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
spao  Saccharomyces paradoxus
Pathway
spao03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPAR_D00810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spao03019]
    SPAR_D00810
   03036 Chromosome and associated proteins [BR:spao03036]
    SPAR_D00810
Enzymes [BR:spao01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SPAR_D00810
Messenger RNA biogenesis [BR:spao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     SPAR_D00810
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     SPAR_D00810
Chromosome and associated proteins [BR:spao03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    SPAR_D00810
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Arcadin_1 AAA_30 DUF6610 Phage_integrase
Other DBs
NCBI-GeneID: 54629328
NCBI-ProteinID: XP_033765114
UniProt: A0A8B8UMX6
LinkDB
Position
IV:complement(171641..173161)
AA seq 506 aa
MGSINNNFSTNNNSNTDLDRDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMG
IFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIM
VPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLAS
RKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKH
LHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLA
KKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDF
PKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGTEIAAIPATIDKSLYVA
ENDETVPVPFPIEQQSYHQQAAPQQQLPSQQQFAIPPQQHHPQFMVPPPHQQQQAYPPPQ
MPSQQGYPPQQEHFMAMPPGQSQPQY
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgggttccatcaataataatttcagcactaataataacagtaatacagatctcgatcgg
gactggaaaactgcattgaatattcctaagaaggataccagaccacagacagatgatgtc
ttgaatacaaagggaaatacttttgaggatttttatttgaaaagagaactgttaatgggt
atttttgaggccggttttgaaaagccatctcctattcaagaagaagccatacccgtagca
ataaccggtagggacatattggcaagggccaaaaatggtacaggtaagacagctgcattt
gttattccgacactagagaaagtcaagccaaagttgaataaaattcaggctttgatcatg
gttcccacaagagagttagctttacaaacttcccaagtcgtccgtacattgggaaaacac
tgtggtatttcatgcatggtgaccactggtggtaccaatctgagagacgatattttaaga
ctaaatgaaacagtccatattttggttggtactcctggtagagtgttggatttggcctca
agaaaagtagcagatctatctgattgttctttatttatcatggatgaggctgataaaatg
ctttctcgtgatttcaagacaataattgaacagattctgtccttcttacctccaacccat
caatctttattatttagtgctacttttccattgacagtgaaggaattcatggttaaacat
ctgcataagccttacgaaattaacttgatggaagaattgaccctaaagggtattactcaa
tactatgcctttgtggaagaaagacaaaagctacattgtttaaatactttattctctaag
cttcaaattaatcaagctatcattttctgtaattctaccaaccgtgtcgaattattagcc
aagaaaattactgatttaggttattcctgttattattctcatgcgagaatgaagcaacaa
gaaagaaataaagttttccacgaatttcgtcaaggtaaggttcgtaccttggtttgttcc
gacttgttgactcgtggtatcgatattcaagctgtcaatgtcgttattaatttcgatttc
ccaaaaacggcagaaacttatttacatcgtattggtagatccggcagatttggccacttg
ggtttggcaatcaatttgattaactggaatgatcggtttaacctgtataagattgaacaa
gaattgggcaccgaaattgcagccattccggctactatcgataagtcattgtatgtggct
gaaaatgacgaaacagttcctgtcccattcccaatagaacaacagagctatcatcagcag
gcggcacctcaacaacaattaccgtctcagcaacaattcgctattcctccacagcaacat
catccacaattcatggttcctcctccgcatcaacaacagcaagcttaccctccaccacaa
atgccttcgcagcaagggtatcctccgcagcaggaacatttcatggcgatgccaccaggt
cagtcacagccccagtattaa

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