Saccharomyces paradoxus: SPAR_D01590
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Entry
SPAR_D01590 CDS
T08193
Name
(RefSeq) Vam6
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
spao
Saccharomyces paradoxus
Pathway
spao04138
Autophagy - yeast
spao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
SPAR_D01590
04148 Efferocytosis
SPAR_D01590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spao04131
]
SPAR_D01590
Membrane trafficking [BR:
spao04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
SPAR_D01590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
DUF627
Motif
Other DBs
NCBI-GeneID:
54629406
NCBI-ProteinID:
XP_033765192
UniProt:
A0A8B8UN53
LinkDB
All DBs
Position
IV:complement(318133..321282)
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AA seq
1049 aa
AA seq
DB search
MLRAQKLHSLKSSDITAILPTEQSQKLVLAKKNGDVEVYSRDGNTLKLFQVYPDLLQNAK
NDPSTPMIENFYFANELSTIFAQCKETLILLSTTNLHEYDRIIDRRGINHCWLFERSHKN
KEEKNTYLIYSTTNTAKMRVLIWEGRTYKNMMEASLSYRKETIRSIYPGETGITLATDLG
IYHWPYNKPSLIRIEKTVKNKFPRDMISALTELKEQAEKVLEKNPKKYSRNDAQSLSSMD
RMSRKSSMSSLWYRSIRNERGNKIRYAFELEGNDATPMVIDGVTKKIFKVELMHNNEEPF
LIATDHATFSESNSEFDHMQYLSSNLLMLYNSSTVKFVDYENGFTFLQQKIPEGIKWVKS
LSGTYFLVWTSNDEIQLFSYHVDDGSEDGDQESICGDINDPDFYQLWRKVLFYKFFIDSP
HSKELCISENPEESLDICAMKLRDLTVMWCLRIFDKFQNYMVQLESSKNSRMIRSKCEEM
IIKNIFDLFIKFWAPPQLVILKVFPSAISSLVLEITGQEHHCLMKEAEEIKETYDIPPHL
LNRWCLPYLTDTRRHLQNLLSKKNDDENCITWCYRDREIKQSFDFFLISNHDDVDLETML
TLIDTVLFKCYLYYNPPMVGPFIRVENHCDSNVIVTELKIRHMFKDLIDFYYKRGNHEEA
LRFLTDLVDELENDNTDQKQHQKIEHGVKILVIYYLKKLSNPQLDVIFTYTDWLLERHQD
SIKEILSSIFFYDSQACNGRNHLKVYEYIKEHDKLLAIQYLEFAISTFRLEGNKLHTVLI
KLYLENLDIPSTRIKLKSLLETTSVYEPRTILKLLNDTIENDSDRLPTNKLNFVKYLKIF
PLSKLENHKESVHILLDEINDYKAATSYCDDVYQNDSTKGEELLLYLYDKLVSIYDSNRN
SKLILNFLQDHGSKLNSVEIYKNLPQDISLYDIGRVVSQLLKKHSSKMDETRLKKALLQV
ELVATTYNLNDRMSSYGVLSDSHKCPICKKVISNFGTDSILWFTREGRNIITHYNCGKVL
QERFNAKNEKSSKIKQKTLGEVINELNNK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgttaagagctcaaaaactacactcgctgaaatcatcggatatcactgcgatattgccc
actgaacagtcacaaaaattagtgttggcaaagaaaaatggtgacgttgaagtgtactct
cgagatggtaatacgcttaaactatttcaggtgtatccagacctcttacaaaatgctaaa
aatgatccttcgactccaatgattgaaaacttttattttgcaaacgagctttctactatc
tttgcacagtgtaaagaaaccttgatcttattaagcactacaaatttacacgagtatgat
cgaataattgacagaagaggtataaaccattgctggctattcgaaaggtcacacaaaaat
aaagaagaaaagaatacttacctaatatattcaaccaccaacactgctaagatgagagta
ttgatatgggagggcaggacctataaaaatatgatggaagcatcattatcgtataggaaa
gaaaccattcggtccatatatcctggagaaacaggaataaccttagcgacagatttaggc
atttatcactggccatataacaagccctccctcatcagaatagaaaaaacagtgaaaaac
aaatttccaagggacatgatatcagcgttaaccgaacttaaagagcaggcagagaaagtc
ctcgaaaagaatcccaaaaagtatagccgtaatgatgctcaatccctttcttctatggac
agaatgtccaggaaatcgagtatgtcaagcttatggtatagaagcataagaaatgaacgt
gggaataaaatacgatatgcttttgaattagaaggcaacgacgctaccccaatggtgatt
gatggtgttactaaaaaaattttcaaggtagagctaatgcataacaatgaggagccattt
ttgatcgccactgatcatgctacattttccgagtcaaattccgaattcgatcacatgcaa
tatttgtcgtccaatctgctgatgttatataattcaagtaccgtcaaatttgttgattac
gaaaatggatttacttttctgcaacaaaaaataccagaaggtataaaatgggtcaagagt
ctctcgggaacctattttttagtatggacttcaaacgatgaaatacagttattttcttat
catgtagacgatggctctgaggatggtgatcaagagtctatttgcggtgacattaacgac
ccagatttttaccaactgtggagaaaagtgcttttttacaagtttttcattgattctcca
cattctaaagagttatgtatttcggaaaaccccgaagaatccttggatatatgtgctatg
aaactaagggatttgacagtaatgtggtgtttaagaatttttgataaatttcaaaattat
atggtccaactagaaagcagtaaaaattcaaggatgattcgttctaaatgtgaagagatg
atcatcaagaatatttttgacctatttatcaaattttgggctccacctcaattagtcata
ttaaaagtgtttccctcagccatttcaagtttggtattggaaattaccggtcaggaacat
cactgcctgatgaaggaagccgaggagattaaagagacttatgacatcccgccgcactta
ttgaacaggtggtgtttaccttatctgactgatacaaggcgacatttgcaaaacttgtta
agcaagaagaacgatgacgaaaattgtataacttggtgctatcgcgaccgtgaaatcaaa
caaagtttcgatttttttcttatcagcaaccatgatgatgttgaccttgaaacaatgtta
actttgatagatacggtattattcaagtgttatctttactataacccccctatggtggga
ccattcattcgtgtagaaaaccactgcgattcaaatgttatagtgacggaattaaaaata
cgtcatatgttcaaagatttaattgatttttattataaacgtggtaatcatgaagaagcc
ttgaggttcctcacggatttggtcgacgaattggaaaacgataatacagaccaaaaacaa
catcaaaaaattgagcacggtgttaaaatattagttatttattatttgaaaaagttatca
aacccacagttagacgttatattcacttatactgactggctgctagaacgacaccaggat
tcaattaaagaaatcctttcatcaatatttttttatgattctcaagcatgcaacggtagg
aaccatttaaaagtatacgagtacatcaaagaacacgataagttactcgctatacaatac
ttagaatttgcgatcagtacttttagattggaagggaataaattgcatactgtcctaatt
aagctgtaccttgaaaacttggatattccctccacaagaatcaaattgaagtcattattg
gaaacaacatcggtctatgagcccagaacaatcttaaaattactgaatgatactattgag
aacgactctgatcggttacccaccaataaactaaacttcgtaaagtatttgaagattttt
cccttgtcaaaactggaaaaccataaggaatctgtgcatatattgcttgatgagataaat
gactacaaagcagcaacaagctactgtgatgacgtataccaaaatgactcgacaaagggc
gaagagcttctgttgtatttatatgacaagttagtctctatatatgattctaataggaac
tccaagctgattttgaattttttgcaagaccacggatcaaaattgaattcggtggagata
tacaaaaacttacctcaggatatttccttgtatgatatcggcagggtggtgtcgcaacta
ttaaagaagcactcgtcaaaaatggatgagaccaggttaaaaaaagcacttctccaggtt
gaacttgtggccaccacttacaatctcaatgaccgcatgtcatcgtatggagtcctatca
gatagccataaatgtcctatctgcaagaaagtaatttcaaattttggaacagattcgatc
ttgtggttcactagggaaggcagaaacatcattacacattataattgtgggaaagtacta
caggaacggtttaacgctaaaaatgaaaagtcttcgaaaattaaacaaaaaactttggga
gaagttataaatgagttaaataataagtaa
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