KEGG   Saccharomyces paradoxus: SPAR_D01590
Entry
SPAR_D01590       CDS       T08193                                 
Name
(RefSeq) Vam6
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
spao  Saccharomyces paradoxus
Pathway
spao04138  Autophagy - yeast
spao04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:spao00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    SPAR_D01590
   04148 Efferocytosis
    SPAR_D01590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spao04131]
    SPAR_D01590
Membrane trafficking [BR:spao04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    SPAR_D01590
SSDB
Motif
Pfam: Vps39_1 DUF627
Other DBs
NCBI-GeneID: 54629406
NCBI-ProteinID: XP_033765192
UniProt: A0A8B8UN53
LinkDB
Position
IV:complement(318133..321282)
AA seq 1049 aa
MLRAQKLHSLKSSDITAILPTEQSQKLVLAKKNGDVEVYSRDGNTLKLFQVYPDLLQNAK
NDPSTPMIENFYFANELSTIFAQCKETLILLSTTNLHEYDRIIDRRGINHCWLFERSHKN
KEEKNTYLIYSTTNTAKMRVLIWEGRTYKNMMEASLSYRKETIRSIYPGETGITLATDLG
IYHWPYNKPSLIRIEKTVKNKFPRDMISALTELKEQAEKVLEKNPKKYSRNDAQSLSSMD
RMSRKSSMSSLWYRSIRNERGNKIRYAFELEGNDATPMVIDGVTKKIFKVELMHNNEEPF
LIATDHATFSESNSEFDHMQYLSSNLLMLYNSSTVKFVDYENGFTFLQQKIPEGIKWVKS
LSGTYFLVWTSNDEIQLFSYHVDDGSEDGDQESICGDINDPDFYQLWRKVLFYKFFIDSP
HSKELCISENPEESLDICAMKLRDLTVMWCLRIFDKFQNYMVQLESSKNSRMIRSKCEEM
IIKNIFDLFIKFWAPPQLVILKVFPSAISSLVLEITGQEHHCLMKEAEEIKETYDIPPHL
LNRWCLPYLTDTRRHLQNLLSKKNDDENCITWCYRDREIKQSFDFFLISNHDDVDLETML
TLIDTVLFKCYLYYNPPMVGPFIRVENHCDSNVIVTELKIRHMFKDLIDFYYKRGNHEEA
LRFLTDLVDELENDNTDQKQHQKIEHGVKILVIYYLKKLSNPQLDVIFTYTDWLLERHQD
SIKEILSSIFFYDSQACNGRNHLKVYEYIKEHDKLLAIQYLEFAISTFRLEGNKLHTVLI
KLYLENLDIPSTRIKLKSLLETTSVYEPRTILKLLNDTIENDSDRLPTNKLNFVKYLKIF
PLSKLENHKESVHILLDEINDYKAATSYCDDVYQNDSTKGEELLLYLYDKLVSIYDSNRN
SKLILNFLQDHGSKLNSVEIYKNLPQDISLYDIGRVVSQLLKKHSSKMDETRLKKALLQV
ELVATTYNLNDRMSSYGVLSDSHKCPICKKVISNFGTDSILWFTREGRNIITHYNCGKVL
QERFNAKNEKSSKIKQKTLGEVINELNNK
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgttaagagctcaaaaactacactcgctgaaatcatcggatatcactgcgatattgccc
actgaacagtcacaaaaattagtgttggcaaagaaaaatggtgacgttgaagtgtactct
cgagatggtaatacgcttaaactatttcaggtgtatccagacctcttacaaaatgctaaa
aatgatccttcgactccaatgattgaaaacttttattttgcaaacgagctttctactatc
tttgcacagtgtaaagaaaccttgatcttattaagcactacaaatttacacgagtatgat
cgaataattgacagaagaggtataaaccattgctggctattcgaaaggtcacacaaaaat
aaagaagaaaagaatacttacctaatatattcaaccaccaacactgctaagatgagagta
ttgatatgggagggcaggacctataaaaatatgatggaagcatcattatcgtataggaaa
gaaaccattcggtccatatatcctggagaaacaggaataaccttagcgacagatttaggc
atttatcactggccatataacaagccctccctcatcagaatagaaaaaacagtgaaaaac
aaatttccaagggacatgatatcagcgttaaccgaacttaaagagcaggcagagaaagtc
ctcgaaaagaatcccaaaaagtatagccgtaatgatgctcaatccctttcttctatggac
agaatgtccaggaaatcgagtatgtcaagcttatggtatagaagcataagaaatgaacgt
gggaataaaatacgatatgcttttgaattagaaggcaacgacgctaccccaatggtgatt
gatggtgttactaaaaaaattttcaaggtagagctaatgcataacaatgaggagccattt
ttgatcgccactgatcatgctacattttccgagtcaaattccgaattcgatcacatgcaa
tatttgtcgtccaatctgctgatgttatataattcaagtaccgtcaaatttgttgattac
gaaaatggatttacttttctgcaacaaaaaataccagaaggtataaaatgggtcaagagt
ctctcgggaacctattttttagtatggacttcaaacgatgaaatacagttattttcttat
catgtagacgatggctctgaggatggtgatcaagagtctatttgcggtgacattaacgac
ccagatttttaccaactgtggagaaaagtgcttttttacaagtttttcattgattctcca
cattctaaagagttatgtatttcggaaaaccccgaagaatccttggatatatgtgctatg
aaactaagggatttgacagtaatgtggtgtttaagaatttttgataaatttcaaaattat
atggtccaactagaaagcagtaaaaattcaaggatgattcgttctaaatgtgaagagatg
atcatcaagaatatttttgacctatttatcaaattttgggctccacctcaattagtcata
ttaaaagtgtttccctcagccatttcaagtttggtattggaaattaccggtcaggaacat
cactgcctgatgaaggaagccgaggagattaaagagacttatgacatcccgccgcactta
ttgaacaggtggtgtttaccttatctgactgatacaaggcgacatttgcaaaacttgtta
agcaagaagaacgatgacgaaaattgtataacttggtgctatcgcgaccgtgaaatcaaa
caaagtttcgatttttttcttatcagcaaccatgatgatgttgaccttgaaacaatgtta
actttgatagatacggtattattcaagtgttatctttactataacccccctatggtggga
ccattcattcgtgtagaaaaccactgcgattcaaatgttatagtgacggaattaaaaata
cgtcatatgttcaaagatttaattgatttttattataaacgtggtaatcatgaagaagcc
ttgaggttcctcacggatttggtcgacgaattggaaaacgataatacagaccaaaaacaa
catcaaaaaattgagcacggtgttaaaatattagttatttattatttgaaaaagttatca
aacccacagttagacgttatattcacttatactgactggctgctagaacgacaccaggat
tcaattaaagaaatcctttcatcaatatttttttatgattctcaagcatgcaacggtagg
aaccatttaaaagtatacgagtacatcaaagaacacgataagttactcgctatacaatac
ttagaatttgcgatcagtacttttagattggaagggaataaattgcatactgtcctaatt
aagctgtaccttgaaaacttggatattccctccacaagaatcaaattgaagtcattattg
gaaacaacatcggtctatgagcccagaacaatcttaaaattactgaatgatactattgag
aacgactctgatcggttacccaccaataaactaaacttcgtaaagtatttgaagattttt
cccttgtcaaaactggaaaaccataaggaatctgtgcatatattgcttgatgagataaat
gactacaaagcagcaacaagctactgtgatgacgtataccaaaatgactcgacaaagggc
gaagagcttctgttgtatttatatgacaagttagtctctatatatgattctaataggaac
tccaagctgattttgaattttttgcaagaccacggatcaaaattgaattcggtggagata
tacaaaaacttacctcaggatatttccttgtatgatatcggcagggtggtgtcgcaacta
ttaaagaagcactcgtcaaaaatggatgagaccaggttaaaaaaagcacttctccaggtt
gaacttgtggccaccacttacaatctcaatgaccgcatgtcatcgtatggagtcctatca
gatagccataaatgtcctatctgcaagaaagtaatttcaaattttggaacagattcgatc
ttgtggttcactagggaaggcagaaacatcattacacattataattgtgggaaagtacta
caggaacggtttaacgctaaaaatgaaaagtcttcgaaaattaaacaaaaaactttggga
gaagttataaatgagttaaataataagtaa

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