Saccharomyces paradoxus: SPAR_D02500
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Entry
SPAR_D02500 CDS
T08193
Name
(RefSeq) Rad28
KO
K10570
DNA excision repair protein ERCC-8
Organism
spao
Saccharomyces paradoxus
Pathway
spao03420
Nucleotide excision repair
spao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SPAR_D02500
09124 Replication and repair
03420 Nucleotide excision repair
SPAR_D02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spao04121
]
SPAR_D02500
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_D02500
Ubiquitin system [BR:
spao04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
SPAR_D02500
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
SPAR_D02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR11_1st
Hira
Motif
Other DBs
NCBI-GeneID:
54629497
NCBI-ProteinID:
XP_033765283
UniProt:
A0A8B8UNE3
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Position
IV:complement(503890..505410)
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AA seq
506 aa
AA seq
DB search
MDPFLQYRLGNISLNEFHRRAIQSELERILEDPLPNMKNYRFSKQSSYNLKKGTPLNIGV
NCLDIDNTGQVLLGGGDDGSLSIWGLEESLHHNDGGEQELINKRLNYIKRQPHQSDDEPA
QVAGYKNKKSRTNDSNAMRLVHSFQTQRNKYRMYRQSNGAVSIPRSHISNKTNSPTGRGE
QLSETDPEASISHHKYGITTLRWYKADNGMFFTGSNDRTVKIWDTNRLEAVQDINLGYKI
NQIDNNVADDSSLLAVASEDYYPRLIDLRTMNSGITTLGMGNQTRMQSEILCCKFNPVRE
QIIACGDMEGGIKLWDLRMRNRLYLELKRNKNGLKTINNDDDEGQSDVYFSSNQSKAHLR
CCSDIVWNSEGSELCSIGMDGKLNIWRPFTEILQPKGMASYFQLGPQDLSRIKYKKRVSQ
RLLWFDKFLLCITDNGEIEIYNTEEEKLWNKLVYPMVNQVKKNLASHCQFSSMVVQTNMM
NSVGLKLFFGTNNNTVSDGGSIFECS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggatccatttttacaatataggttaggtaacatttcattaaatgaatttcatagaagg
gctattcaaagcgaactagagaggattcttgaagatcccttaccaaacatgaagaactac
cgatttagcaaacaatccagctataatctaaagaaaggcactccgttgaatataggcgtc
aattgtcttgacattgataatactggtcaagtattgttagggggcggagatgatggctct
ctttccatatggggtttagaagaatcattgcaccataatgatggaggtgaacaggaattg
atcaataaaagattaaactatatcaagcgacagcctcaccagtctgatgatgaacctgct
caagtggcgggttataagaataaaaaatcacgaacaaacgatagcaacgctatgagattg
gtgcacagttttcaaacacaaagaaataaatatcgaatgtatagacagtctaatggtgca
gtttcaattccaagatcgcacatatcaaataaaacaaattcccctaccgggcgtggtgag
cagctatccgaaaccgatccagaagcttccatatctcaccacaaatatggcataacaact
ttaagatggtacaaagcagataatggaatgtttttcactggatccaatgatagaactgtc
aaaatatgggacacaaacagacttgaagcagttcaagatataaacctggggtataaaata
aatcaaattgacaataacgttgccgacgacagttctttgcttgcggttgcaagtgaagat
tactacccgagattaatcgacctgagaaccatgaattcagggataaccacgctcggaatg
ggaaaccaaacacgaatgcaatctgaaattttatgctgcaaattcaaccccgtgagggag
cagattattgcatgtggtgacatggagggtggaataaaattatgggacttaagaatgaga
aacagattgtatttagaattgaagagaaataaaaacgggctcaagactataaataacgat
gatgacgagggccaaagcgacgtttactttagttccaatcaatcaaaagctcatttaaga
tgttgtagtgacattgtttggaacagtgagggttcagaactatgctcaattggcatggat
ggaaaattgaatatttggaggccttttacggaaattttgcaaccaaaaggtatggctagt
tatttccagttgggaccacaggacctgagccgtatcaaatacaaaaaaagagtttcccaa
aggctactttggtttgacaagtttttactgtgtattactgacaatggagaaatagaaata
tataatacggaagaagagaaactttggaacaagctcgtatacccaatggttaatcaagta
aaaaaaaacctggcgtcgcattgtcagtttagttcaatggtcgtgcaaacaaatatgatg
aattcggtgggcctcaaattattctttggaaccaacaacaacactgttagcgatggaggt
tccatctttgaatgttcataa
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