Saccharomyces paradoxus: SPAR_D02970
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Entry
SPAR_D02970 CDS
T08193
Name
(RefSeq) Vps41
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
spao
Saccharomyces paradoxus
Pathway
spao04138
Autophagy - yeast
spao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
SPAR_D02970
04148 Efferocytosis
SPAR_D02970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spao04131
]
SPAR_D02970
Membrane trafficking [BR:
spao04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
SPAR_D02970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Vps41
TPR_Vps41
Clathrin
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Vps39_1
Beta-prop_EML_2
EIF3I
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
54629544
NCBI-ProteinID:
XP_033765330
UniProt:
A0A8B8UNH3
LinkDB
All DBs
Position
IV:591906..594902
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AA seq
998 aa
AA seq
DB search
MTIDNLQNDSNLNQQPDERKIDKSDSISDKNNVDNKWEAVGVTPPTENVGCISQADDEIV
SKTDRSTITGSATEAEANDNDDDESESEEDEGDGDEDDEDEDEPPSLKYTRISQLPKNFF
QRDSISSCLFGDTFFAFGTHSGILHLTTCAFEPIKTIKCHRSSILCINTDGKYFATGSID
GTVIIGSMDDPQNITQYDFKRPINSVALHSNFQASRMFVSGGMAGDVVLSQRNWLGNRID
IVLNKKKKKKTKKDDQSSDMKGPIMGIYTMGDLILWMDDDGITFCDIPTRSQLLNIPFPS
RIFNVQDVRPDLFRPHVHFLESDRIIIGWGSNIWLFKVSFTKDSNSIKYGDSNSQSNNMS
HFNPTTNIGSLLSSAASSFRGTPDKKVELECHFTLSMLIAGLASFKDDQLLCLGFDIDIE
EEVAVDGSKEEGVYFSKGPENLLLKGNAPELKIVDLFNGDEIYNDEVIMKNYEKLSLNDY
HLGKHIDETTPEYYLISSNDAIRVQELSLKDHFDWFIERNQFYKAWKIGKYVIGSEERFG
IGLKFLNALVAKKDWGTLVDHLNIIFEETLNSLDSSSYDVIQKVLKEWANIIEVLIRSEK
IVEIAPLIPKKPALRKSVYDDVLHYFLANDMINKFHEYIIKWDPKLFSVDDFEEELETRI
ETANEPTATSNKGGSNITYRTELVYLYLKENKYTKAIPHLLKAKDLRALTIIKLQNLLPQ
YLDQIVDIILLPYKGEISHIPKLSIFEIQTIFNKPIDLLFENRHTISIDRIYEIFGHGCP
KSFNKILFCYLIKFLDTDDSFMINPYENQLIEFFSEYDRQSLLPFLQKHNNYNVETAIKV
CSSKAGLYNELIYLWGKIGETKKALSLIIDELQNPQLAIDFVKNWGDSELWEFMINYSLD
KPNFTKAILTCSDETSEIYLKVIRGMSDDLQIDNLQDIIKHIVQENSLSLEVRENILVII
NDETKKFGNEFLKIRSQGKLFQVDESDNEINDDLHSVL
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagataaccttcagaatgattccaatttgaatcaacaaccagacgaacggaaa
attgataaaagtgattccatctctgacaagaataatgttgataataagtgggaggccgtt
ggtgtaactccaccaacagagaatgttggttgcatatcacaagcagatgatgaaatagtc
tctaaaacagataggagtacaataacaggaagtgcgacagaagcagaagcaaatgataat
gacgatgatgaaagtgaaagtgaagaagatgaaggtgacggagatgaagatgacgaagat
gaagatgagccgccttcattgaagtacacacgaatcagtcaactcccgaagaactttttt
caacgagactcaatctcctcatgtttgtttggtgatactttttttgcatttggtacgcac
tcaggcattctacatttaaccacatgcgcatttgagcccattaaaactattaaatgtcac
agatcttcgatactttgtattaatacggatggaaaatattttgctactggatccattgat
ggcacagttattattggatcgatggatgatccacagaacattacacaatacgatttcaaa
agacctataaattccgtagcattgcactcaaatttccaagcatccagaatgtttgtttcc
ggtggaatggctggggacgtggtactatctcaaagaaattggttaggaaatagaatagac
attgttttgaacaagaagaaaaagaagaagacaaagaaagatgatcaatcctctgatatg
aagggcccaatcatgggaatatatactatgggtgaccttatattatggatggatgatgat
ggaattacattttgcgacattcctacaagatcacagcttttgaatattccattcccctcc
aggatttttaacgtacaggatgtaagaccagatctatttagacctcacgttcatttcttg
gaaagtgatcgtattattatcgggtggggatccaatatttggctgttcaaggtttccttt
accaaggattcaaattcgatcaaatacggtgactctaattctcaaagtaataatatgagt
catttcaacccgacgacaaacatcggatctctcttgtctagtgctgcttcgagttttaga
gggacacctgataagaaagttgaattggaatgtcattttactctgtcaatgctgattgca
gggcttgcatcatttaaggatgaccagttattatgtctgggatttgatatagatattgaa
gaggaagtagctgttgatggaagtaaggaggagggcgtgtattttagcaaagggccagaa
aatttactacttaaagggaatgccccggaattaaaaattgttgatctttttaatggtgat
gaaatctataatgatgaagttatcatgaaaaattatgaaaaactatctttaaatgactat
cacctcggtaaacacatagatgaaacaacaccagaatactatttgataagttccaatgat
gctatcagggttcaagaattatcattgaaagatcatttcgattggtttatagaaagaaat
caattttacaaagcttggaaaatcggtaaatatgtcattggatcagaggagaggtttggt
ataggcttaaagttccttaacgctttagtggctaaaaaagattggggtacattagtggac
cacttaaatatcatcttcgaagaaactttaaactcattagattccagctcatatgatgtc
attcaaaaggtgctgaaagagtgggcgaatataatagaagttttgattagatcagaaaaa
attgtagaaattgcgcctttgataccaaaaaaacctgccttaagaaagtctgtatatgac
gatgtattacattactttttagccaatgatatgatcaataaatttcatgaatacattatt
aaatgggatccaaagcttttttctgtggacgatttcgaggaagagctagaaacaagaata
gagactgctaatgaacctacagccacatccaataaaggagggtccaatattacttatagg
acagagttagtatatttatatttgaaagagaataaatataccaaggctataccgcacttg
ttgaaagctaaggatttaagagctttgactattataaaattacaaaatttgttgccacag
tacctagaccagatcgtggatatcattcttttaccgtataaaggtgaaatttcccatatt
cccaaactatcaatatttgaaattcaaacaatttttaacaaaccaattgatcttttattc
gaaaatagacataccatatcaattgatagaatatatgaaatatttggacatggttgtcca
aaaagtttcaacaagattttattttgttatttgataaaatttttagatacggatgactcg
ttcatgatcaatccttatgagaatcaactaattgaatttttttctgaatacgaccgacaa
agtcttctaccctttttgcaaaagcacaataactacaatgtggagactgccatcaaggtc
tgctcatcgaaggctggtttatacaatgaattgatctatttgtgggggaaaattggtgaa
acaaagaaagcattatctttaattatcgatgagttgcaaaacccgcaattggctatagat
tttgttaagaactggggtgattcggaactttgggaatttatgataaactatagtcttgat
aaacctaatttcactaaagccattctaacatgttctgatgagactagtgaaatttaccta
aaagtgatcagaggcatgtccgacgatttacaaattgacaatttgcaggatataattaag
catattgttcaagagaattcactgagcttggaagttagagaaaatattttggtaatcatt
aatgatgaaacaaaaaagtttggcaatgaattcctgaaaataagaagtcaaggtaaattg
tttcaagtggacgaaagcgataacgaaattaatgacgacttacacagtgttctataa
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