Saccharomyces paradoxus: SPAR_D03080
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Entry
SPAR_D03080 CDS
T08193
Name
(RefSeq) Rli1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_D03080
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
SPAR_D03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
Fer4
AAA_22
AAA
RsgA_GTPase
AAA_16
AAA_15
AAA_29
Fer4_6
Rad17
VapE-like_dom
AAA_14
nSTAND3
AAA_23
NB-ARC
Fer4_21
AAA_30
Fer4_10
Fer4_2
NACHT
TsaE
Fer4_16
SRP54
Fer4_9
Fer4_7
AAA_5
Fer4_4
NPHP3_N
Fer4_3
DLIC
AAA_7
Fer4_17
AAA_13
Fer4_8
MobB
Motif
Other DBs
NCBI-GeneID:
54629555
NCBI-ProteinID:
XP_033765341
UniProt:
A0A8B8UNW5
LinkDB
All DBs
Position
IV:complement(614397..616223)
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AA seq
608 aa
AA seq
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MSDKNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGI
CVKKCPFDAIQIINLPTNLEAHVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTAL
KILAGKQKPNLGRFDDPPEWQEIIRYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAI
KGPVQKVGELLKLRMEKTPEDVKRYIKILQLEHVLKRDIEKLSGGELQRFAIGMSCVQEA
DVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPSV
YGVVTLPASVREGINIFLDGHIPAENLRFRTEALQFRIADATEDLQNDSASRAFTYPSLR
KTQGDFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQ
KIAPKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVL
ALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIV
FEGIPSKNAHARAPESLLTGCNRFLKNLNVTFRRDPNSFRPRINKLDSQMDKEQKSSGNY
FFLDNTGI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaaacagtcgtatcgctattgttagcgctgataaatgtaaaccaaagaag
tgtcgtcaagagtgtaaacgttcatgtcctgttgtgaaaactggtaaattatgtatcgaa
gtcactccaacttcaaagattgcattcatctccgaaatcttgtgtatcggttgtggtatt
tgtgttaagaaatgtccatttgatgctattcaaattattaatttgccaactaatttagaa
gcccatgtcactcaccgttactctgccaatagtttcaagttgcacagattgccaactcca
agaccgggtcaagtccttggtttggtcggtaccaacggtatcggtaaatctaccgccttg
aaaatcttagctggtaaacaaaaacctaatttaggtcgttttgatgatcctcctgaatgg
caggaaattatcagatacttccgtggttctgaattacaaaactatttcaccaagatgctg
gaagatgatatcaaggctatcattaaacctcaatacgttgataacattccccgtgctatt
aagggcccagttcaaaaagttggtgagcttttgaaactgagaatggaaaagactcccgaa
gatgtaaaacgttacatcaaaattttacaattggagcatgttttaaagagagatatcgaa
aagttatcaggtggtgaattgcaaagatttgccattggtatgtcatgtgttcaagaggct
gatgtttatatgttcgatgaaccttcatcttatttggatgttaaacaacgtttgaatgct
gcccaaattatcaggtctctgttggccccaaccaaatacgttatttgtgttgagcacgat
ttgtcagttttggattatctttctgatttcgtttgtattatatatggtgttccatctgtt
tacggtgttgttacattaccagcttctgtcagagaaggtatcaacatattcttggatggt
catattcccgctgaaaatctaagattcagaactgaagctttacaatttagaatagccgat
gccaccgaagacttacaaaatgactctgctagtcgtgccttcacttatccaagtttgaga
aaaacccaaggtgatttcgtattgaatgtagaagaaggtgaattctccgattctgaaatc
cttgttatgatgggtgaaaacggtaccggtaagaccactttgatcaaattgctagctggt
gctttgaagccagatgaaggacaagatattcctaagctgaatgtctccatgaaaccacaa
aaaattgcaccaaagttcccaggtaccgttagacaattgtttttcaaaaaaattagaggt
caatttctaaatccacaatttcagactgatgtcgttaagcctttaagaattgacgatatt
attgatcaagaagtccaacatttgtccggtggtgaattacaaagagttgccatcgtcttg
gcattaggtatcccagcagacatatacttgattgatgagccatctgcttacttagattcc
gaacaacgtattatttgttccaaagttatcagaagattcatcttgcataataagaaaact
gcgtttattgtcgagcacgatttcattatggctacttatcttgctgacaaggtcattgtc
tttgaaggtatcccttccaagaatgctcatgcaagagcccctgaatctttgttaactggt
tgtaacagatttttgaagaatttgaatgtcactttcagaagggatccaaactctttcaga
ccaagaattaacaagttagattcccaaatggataaagaacaaaaatcatcggggaactac
tttttcttggataacaccggtatttaa
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