KEGG   Saccharomyces paradoxus: SPAR_D03080
Entry
SPAR_D03080       CDS       T08193                                 
Name
(RefSeq) Rli1
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
spao  Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:spao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spao03009]
    SPAR_D03080
Ribosome biogenesis [BR:spao03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    SPAR_D03080
SSDB
Motif
Pfam: ABC_tran Fer4_RLI AAA_21 SMC_N Fer4 AAA_22 AAA RsgA_GTPase AAA_16 AAA_15 AAA_29 Fer4_6 Rad17 VapE-like_dom AAA_14 nSTAND3 AAA_23 NB-ARC Fer4_21 AAA_30 Fer4_10 Fer4_2 NACHT TsaE Fer4_16 SRP54 Fer4_9 Fer4_7 AAA_5 Fer4_4 NPHP3_N Fer4_3 DLIC AAA_7 Fer4_17 AAA_13 Fer4_8 MobB
Other DBs
NCBI-GeneID: 54629555
NCBI-ProteinID: XP_033765341
UniProt: A0A8B8UNW5
LinkDB
Position
IV:complement(614397..616223)
AA seq 608 aa
MSDKNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGI
CVKKCPFDAIQIINLPTNLEAHVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTAL
KILAGKQKPNLGRFDDPPEWQEIIRYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAI
KGPVQKVGELLKLRMEKTPEDVKRYIKILQLEHVLKRDIEKLSGGELQRFAIGMSCVQEA
DVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPSV
YGVVTLPASVREGINIFLDGHIPAENLRFRTEALQFRIADATEDLQNDSASRAFTYPSLR
KTQGDFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQ
KIAPKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVL
ALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIV
FEGIPSKNAHARAPESLLTGCNRFLKNLNVTFRRDPNSFRPRINKLDSQMDKEQKSSGNY
FFLDNTGI
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgagtgataaaaacagtcgtatcgctattgttagcgctgataaatgtaaaccaaagaag
tgtcgtcaagagtgtaaacgttcatgtcctgttgtgaaaactggtaaattatgtatcgaa
gtcactccaacttcaaagattgcattcatctccgaaatcttgtgtatcggttgtggtatt
tgtgttaagaaatgtccatttgatgctattcaaattattaatttgccaactaatttagaa
gcccatgtcactcaccgttactctgccaatagtttcaagttgcacagattgccaactcca
agaccgggtcaagtccttggtttggtcggtaccaacggtatcggtaaatctaccgccttg
aaaatcttagctggtaaacaaaaacctaatttaggtcgttttgatgatcctcctgaatgg
caggaaattatcagatacttccgtggttctgaattacaaaactatttcaccaagatgctg
gaagatgatatcaaggctatcattaaacctcaatacgttgataacattccccgtgctatt
aagggcccagttcaaaaagttggtgagcttttgaaactgagaatggaaaagactcccgaa
gatgtaaaacgttacatcaaaattttacaattggagcatgttttaaagagagatatcgaa
aagttatcaggtggtgaattgcaaagatttgccattggtatgtcatgtgttcaagaggct
gatgtttatatgttcgatgaaccttcatcttatttggatgttaaacaacgtttgaatgct
gcccaaattatcaggtctctgttggccccaaccaaatacgttatttgtgttgagcacgat
ttgtcagttttggattatctttctgatttcgtttgtattatatatggtgttccatctgtt
tacggtgttgttacattaccagcttctgtcagagaaggtatcaacatattcttggatggt
catattcccgctgaaaatctaagattcagaactgaagctttacaatttagaatagccgat
gccaccgaagacttacaaaatgactctgctagtcgtgccttcacttatccaagtttgaga
aaaacccaaggtgatttcgtattgaatgtagaagaaggtgaattctccgattctgaaatc
cttgttatgatgggtgaaaacggtaccggtaagaccactttgatcaaattgctagctggt
gctttgaagccagatgaaggacaagatattcctaagctgaatgtctccatgaaaccacaa
aaaattgcaccaaagttcccaggtaccgttagacaattgtttttcaaaaaaattagaggt
caatttctaaatccacaatttcagactgatgtcgttaagcctttaagaattgacgatatt
attgatcaagaagtccaacatttgtccggtggtgaattacaaagagttgccatcgtcttg
gcattaggtatcccagcagacatatacttgattgatgagccatctgcttacttagattcc
gaacaacgtattatttgttccaaagttatcagaagattcatcttgcataataagaaaact
gcgtttattgtcgagcacgatttcattatggctacttatcttgctgacaaggtcattgtc
tttgaaggtatcccttccaagaatgctcatgcaagagcccctgaatctttgttaactggt
tgtaacagatttttgaagaatttgaatgtcactttcagaagggatccaaactctttcaga
ccaagaattaacaagttagattcccaaatggataaagaacaaaaatcatcggggaactac
tttttcttggataacaccggtatttaa

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