Saccharomyces paradoxus: SPAR_D04330
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Entry
SPAR_D04330 CDS
T08193
Name
(RefSeq) Prp42
KO
K13217
pre-mRNA-processing factor 39
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spao03041
]
SPAR_D04330
Spliceosome [BR:
spao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SPAR_D04330
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
54629680
NCBI-ProteinID:
XP_033765466
UniProt:
A0A8B8UP86
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Position
IV:902136..903770
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AA seq
544 aa
AA seq
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MDKYTALINDENFSTLTLSVSRYPKSLVYWERLLNYIVKASAPICKSTEPQLLELIRHTY
SSMLNEFPYLENYYIDFALLEYKLGNVSTSHKIFQRGLQAFNQRSLLLWTSYLKFCNNVV
LNQKQLFKKYETAEEYVGLHFFSGEFWDLYLEQIRSRCTSSKRYWNVLRKILEIPLHSFS
KFYALWLQNIDDIMDLKQLSQLTSKDELLKKLKIDINYSGRKGPYLQDAKKKLRKITKEM
YMVVQYQVLEIYSIFESNIYINYYTSPETLVSSDEIETWIKYLDYTITLQTDSLTHLNFQ
RALLPLAHYDIVWIKYSKWLINSKKDLVGAKNVLLMGLKFSLKKTKIIKLLYSVICKLND
YVLLRNLLEKIESSYSDNVENVDDFEIFWDYLQFKTFCQNSLYSSRYSDSQSNGLLNKEL
FDKVWKRLSCKEKKSGQEILLNNLVQFYSKDTVEFVEKNIFQKIITSGWKYYLQNSIFWN
CYCRLIYFDASRSYLDKRQYIVKKIWPQIDKKFAQSVLPSLTEFCQSYFPEEMDTLEEMF
TEEP
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggataagtatactgctttaattaatgatgagaatttttcaactcttacattgagtgtc
tcaagatatcccaaaagtttggtatattgggagagattactgaactatatagtaaaggct
tccgcaccaatttgcaagtccactgagcctcaactactagagctaatacgacatacatat
tcttctatgctaaatgagtttccctatttagaaaactactatatcgacttcgcattactg
gagtacaaattggggaatgtttctacctcgcataagatatttcaacgcggattgcaagcc
tttaatcaaagatctttgctactgtggacgtcgtatctaaagttttgtaataacgttgtc
ttaaaccagaagcaattgtttaaaaaatatgaaacagctgaagaatatgtcggtttgcat
tttttcagtggagaattttgggatttgtatctggaacaaatcagatcaagatgcacatct
tcaaagaggtattggaacgttttgaggaagatactagaaattcctttacactctttttcg
aaattttatgcgttatggttgcagaatatagacgatataatggatctgaagcagctgtca
cagctaacaagtaaagatgaattattgaaaaaactcaagatagatatcaattatagtgga
aggaaaggtccataccttcaagatgcaaagaaaaagttgaggaaaataacgaaggaaatg
tacatggttgttcaataccaagtgctagaaatttattccatttttgaatcaaatatttat
atcaactattacacatctccagaaaccttggtttcttcagatgaaatagaaacatggata
aaatatctggattacaccatcactttacaaaccgattctttaacccatttaaatttccaa
agggctttacttcctctggcccattatgatattgtatggataaaatacagtaaatggttg
ataaattcaaaaaaagaccttgtgggggcgaaaaacgttctattaatgggtttgaaattt
tctttgaagaagaccaaaataataaaattactgtattcagttatctgtaagttgaatgac
tacgtacttttacgaaatctattggaaaaaattgagtcctcatattctgacaacgttgaa
aatgttgatgattttgagatattttgggattaccttcaatttaaaacgttctgtcagaat
tctctgtattctagtcgatattctgattctcaatcgaacggacttctaaataaagagcta
tttgataaagtatggaaacgtttgagctgtaaagaaaagaaaagtggtcaagaaatttta
ttgaataacttagtacagttttattcaaaggacaccgttgagttcgtagaaaaaaacata
tttcaaaaaataataacatctggctggaaatactacctacagaacagtatattttggaac
tgttattgccgtttgatttatttcgatgcttctagatcatatctggacaagaggcaatat
attgtcaaaaaaatatggccccaaatagacaagaaatttgcacagagtgttctgccatct
ttaacagaattctgtcaatcatacttccccgaagaaatggatacattagaagaaatgttt
actgaagaaccttag
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