Saccharomyces paradoxus: SPAR_D05170
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Entry
SPAR_D05170 CDS
T08193
Name
(RefSeq) Utp4
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
spao
Saccharomyces paradoxus
Pathway
spao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAR_D05170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_D05170
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAR_D05170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_EML
Beta-prop_WDR3_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR11_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
54629764
NCBI-ProteinID:
XP_033765550
UniProt:
A0A8B8UP40
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Position
IV:complement(<1066929..>1069262)
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AA seq
777 aa
AA seq
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MNELIATFNFKEKPRRLKIRRKTVKMTSQERMIVHRCRFVDFTPATITSLAFSHKSNINK
LTPSDLRLAIGRSNGNIEIWNPRNNWFQEMVIEGGKDRSIEGLCWSNVSGESLRLFSIGG
STVVTEWDLATGLPLRNYDCNSGVIWSISINDSQNKLSVGCDNGTVVLIDISGGPGVLEH
DNILMRQEARVLTLAWKKDDFVIGGCSDGRIRIWSVQKDDVNSGRLLHTMKVDKAKKEST
LVWSVIYLPRTDQIASGDSTGSIKFWDFQFATLNQSFKAHDADVLCLTTDTDNNYVFSAG
VDRKIFQFSQNTNKSQKNNRWVNSSNRLLHGNDIRTICAYQSKGADFLVSGGVEKTLVIN
SLTSFSNGNYRKMPTVEPYSKNVLVNKEQRLVVSWSESTVKIWTMGTDSDKEQNYKLVCK
LTLKDDQNISTCSLSPDGQVLVVGRPSTTKVFHLQPVGSKLKVTKLDNVLLLRTATKLVK
FIDNSKIVICTCEDDVFIVDLESEDDEKPQEIELLEITSTKSSIKVPYINRINHLEVNQN
IAVISRGCGAVDILDLKTRISKSLARLNNFVTAVHINTPRKSVVVITADNKIYEFNMNLN
LEAENEDSESVLTQWSKNNTDNLPKEWKTLKENCVGIFSDMNNSNRLWFWGATWISRIDF
DIDFPINKRRKQKKRTHEGLTITDESNFMNDEEDDEDDDIDMEISENLNVLLSQGNKIKS
TDVHRSEESSSRFFFTDKYKPLLFVDLISSNELAIIERKPLSSHSKQKAFIQPKLVF
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagctcatcgcgactttcaactttaaagagaagccaagaaggctaaaaatacga
agaaaaactgtgaagatgaccagccaggaaagaatgatagtgcacagatgcagatttgtg
gattttacacctgccacgatcacatctctagcattttcacacaaatcgaatataaataag
ttgactccatccgatttgagattagctatcggtagatctaatggtaacatagaaatctgg
aatcctagaaacaattggtttcaggaaatggttattgaaggtggtaaagacagatcaatt
gaaggtctttgctggagcaacgtcagcggtgagtctttgagactattttctattggaggt
tcaactgtggttacagaatgggatttagcaacgggtttaccattaagaaactatgattgt
aattcaggtgtgatatggtctatttccattaacgattcacagaacaagttgtctgtgggt
tgcgataatgggacagtagttctcatagatatttctgggggacctggtgtcttggaacat
gacaacattttaatgagacaagaggccagagtattgactttggcttggaaaaaggatgat
ttcgtgattggtggttgttctgatggtaggataagaatatggtctgtacagaaagatgac
gtaaacagtggtcgtctattacacaccatgaaggttgacaaggccaaaaaagaatcaact
ttagtttggtcagttatatacttaccaagaactgatcaaattgcctccggtgattctaca
ggctccatcaaattctgggatttccaatttgccacgctaaaccagtcattcaaagcgcac
gatgcagacgttttgtgtctaactaccgataccgataataattatgtgtttagcgctggt
gtggacagaaaaatcttccaattctcccaaaacactaacaaatctcaaaagaacaacaga
tgggtaaattcttccaataggttgcttcatggaaacgatattagaactatatgtgcatat
caatctaaaggtgctgattttttggtctcaggtggtgttgaaaaaacactagtcattaac
tcgttgacttctttttctaatggaaactataggaagatgccaactgtcgaaccttattca
aagaatgttttggtcaacaaagaacagcgcctggtggtttcatggagcgaatctactgtt
aagatatggacaatgggaactgattctgacaaagagcaaaattataagcttgtttgcaag
ctaactttaaaggatgaccagaatatttcaacgtgctctttatcacctgatggacaagtt
ttggttgtggggagaccctctaccactaaagtttttcacttgcagccagtaggcagtaaa
ttgaaagtgaccaagctagataatgtcttattattgagaactgctacaaaattagtcaaa
tttatcgataattccaaaattgtcatatgcacttgcgaagatgatgtatttattgtggat
ttagaatctgaagatgacgaaaaaccacaagaaattgaacttttggaaattacttcaact
aaaagtagcattaaagttccatatatcaacaggattaaccatttggaagtgaaccagaac
attgcagtgatttctcgtggatgtggggctgtagacatattagacttaaagacaaggatt
tctaaatcactggctcgtttgaataactttgtcaccgctgttcatattaacacccctaga
aaatcggtagtagtgattactgcggacaataagatttatgagttcaatatgaatttgaat
ttagaagccgaaaatgaagatagcgaaagcgtattgactcaatggtcaaaaaacaataca
gataacttaccaaaagaatggaagacattgaaagagaactgcgtgggaatattttcagac
atgaacaatagtaacagattatggttttggggcgctacttggatatcaagaatagacttt
gacattgatttccctataaataaaagaagaaagcagaaaaaacgtacacacgaaggacta
actatcacagacgaaagtaatttcatgaatgacgaggaagatgacgaagatgacgatatt
gatatggaaatcagtgaaaacctgaatgtattattaagccaaggaaacaaaataaagtcc
acggatgtacacagaagtgaggaaagctcaagtcgcttcttctttactgataaatataaa
cccctactatttgttgacttaatttcaagtaatgaattagcaatcattgaaagaaaacca
ctaagttctcattccaaacaaaaggcatttattcaaccgaagttagtgttctga
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