Saccharomyces paradoxus: SPAR_D05870
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Entry
SPAR_D05870 CDS
T08193
Name
(RefSeq) Utp5
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
spao
Saccharomyces paradoxus
Pathway
spao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAR_D05870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_D05870
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAR_D05870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
EIF3I
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_THOC3
WDR55
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Cmr7b-like
WD40
WD40_WDHD1_1st
CBM9_1
Beta-prop_LRRK2
Beta-prop_BBS7
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
54629834
NCBI-ProteinID:
XP_033765620
UniProt:
A0A8B8UPB3
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All DBs
Position
IV:<1214706..>1216637
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AA seq
643 aa
AA seq
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MDSPVLQSAYDPSGQYLCYVTVALDKQRVGVQPTQRATSSGVDTVWNENFLYLEDSKLQV
TCLKWVTLASSDTVTIILGMNNGEIWLYSVLANEVTYKFTTGNSYEIKDIDLIGNQLWCI
DSSDAFYQFDLLQFKLLQHFKINNCVQLNKLAIVPAGNSATQLLVASHSISLIDIEEKKV
VMTFPGHVSPVSTLQIITNDFFISGADSDRFLNVYDIHSGMTKCVLVAESDIKELSHSGQ
ADSIAVTTEDGSLEIFVDPLVSNSTKKRGNKSKKSNKKIQIASKDGRKVPIYNAFINKEL
LNVSWLQNATMPYFKNLQWREIPNEYTVEISLNWSTKNKSADRDLHGKDLASATNYVEGN
ARVTSGDNFKHVDDAIKSWERELTSFEQEQAKSPQANELLTETFGDKLESSTIARLNGKK
TNLKGSNLKTATTTGTVTVILSQALQSNDHSLLETVLNNRDERVIRDTIFRLKPALAVIL
LERLAERIARQTHRQGPLNVWVKWCLIIHGGYLVSIPNLMSTLSSLHSTLKRRSDLLPRL
LALDARLDCTINKFKSLNLETGDMYSSEPVVEEDEDDVEYNEELDDAGLIEDGEESYESE
DEEGDSDSEEEEKHASSKQDGRSEREQTNHDEEEAGYSDVEME
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggattctcctgttctacagtccgcttacgacccatcaggtcaatatttgtgttatgtc
actgtagctttagacaagcaacgtgttggtgtacagcccacccagagggccacttcctcc
ggagtcgatacagtatggaatgagaactttctgtatttggaggactcaaaattgcaggtt
acatgcttaaaatgggtaaccctagcttcttccgatacagtgaccattatattaggtatg
aataacggtgaaatctggctatattccgtgttggctaacgaagtcacgtataaattcact
acaggaaattcttacgaaatcaaagacatagatttgattggtaaccaactgtggtgtatc
gactccagcgacgcgttctatcaatttgatcttttacaatttaaactgttacaacatttt
aaaataaacaactgcgttcaattgaataaattagccattgttcccgcgggaaattctgcc
acacaacttttggttgcatcccattccatttctttaatcgatatcgaagagaaaaaagtc
gtaatgacatttccaggtcatgtatctccagtgtcgacgttgcaaattataactaacgat
tttttcatatcaggtgcagacagtgatagattcttgaacgtatatgatattcattccggc
atgaccaaatgcgtccttgtggccgaatcagatatcaaagagttgtcccattcaggtcaa
gctgattctatcgcagtcactactgaggatggtagcctggaaatttttgttgatccattg
gtatcgaactcaacgaagaagagaggcaacaagtcaaaaaaatctaacaagaagattcaa
atcgccagtaaagacggcaggaaagttccgatttataacgcgtttattaataaagaactt
ttgaacgtatcatggttacaaaatgctacaatgccttacttcaagaacttgcagtggaga
gaaattcccaatgaatacaccgtcgaaatttccctaaattggagtactaaaaataagtcc
gctgatcgtgacttgcatggtaaagatctggcttcagccaccaactacgtcgaaggtaat
gcgagagtcacttctggagataacttcaagcatgttgatgacgctataaagagttgggaa
agagaattgacttctttcgagcaagagcaggccaagtccccgcaggccaatgaactacta
acagagactttcggcgataagctagaatcaagcaccattgctaggcttaacgggaaaaaa
actaatttgaaaggttctaatctcaagactgccacgacaacaggtacagtaacagtaatt
ttgtcgcaagcattacaatcaaacgaccattcactattggaaacagtgctcaataatcgt
gacgagagagtcatcagagatactatattccgtttgaaaccagcgctggctgtcattctc
ttagaaaggttggcagagaggattgccagacaaactcaccgtcaaggtccgttaaacgta
tgggtgaaatggtgcttgatcatacacggtggctatttggtttccattccaaatttgatg
tccactttatcgtcgttgcattccaccctgaaaaggcgttccgatttattaccaagacta
ctagcactggatgccaggttagactgtactatcaataaattcaagtctttgaatttagaa
acaggtgacatgtattcatcagaaccagttgtcgaagaagatgaagacgacgtcgaatat
aatgaagagctcgatgatgccggtcttatagaggatggcgaagaatcttatgaaagtgaa
gacgaagaaggtgatagtgacagcgaagaggaagagaagcatgcctcatcgaagcaagat
ggccgctcagaaagggagcagaccaaccatgacgaggaggaagccggctatagtgatgtt
gagatggaatag
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