Saccharomyces paradoxus: SPAR_D06160
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Entry
SPAR_D06160 CDS
T08193
Name
(RefSeq) Npl3
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
spao
Saccharomyces paradoxus
Pathway
spao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPAR_D06160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spao03021
]
SPAR_D06160
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_D06160
Transcription machinery [BR:
spao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SPAR_D06160
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SPAR_D06160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
54629862
NCBI-ProteinID:
XP_033765648
UniProt:
A0A8B8UPG2
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All DBs
Position
IV:1276588..1277844
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AA seq
418 aa
AA seq
DB search
MSDPQETHVEQLPESVVDAPVEEQHQEPQAPQAPEAPQVPQESAPQESLPQESAPQEPLA
PQEQHDVPPPSNAPVYEGEESHSVQDYQQAHQHHQPPEPQPYYPPPPPGEHMHGRPPMHH
RQEGELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNGFAFVEFEEADSAAKAIE
EVNGKSFANQPLEVVYSKLPAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRD
FDGTGALEFPSEEILVEALERLNNIEFRGSVITVERDDNPPPIRRSNRGGFRGRGGFRGG
FRGGFRGGFSRGGFGGPRGGFGGPRGGYGGYSRGGYGGYSRGGYGGSRGGYDSPRGGYDS
PRGGYSRGGYGGPRNDYGPPRGSYGGSRGGYDGPRGDYGPPRDAYRTRDAPRERSPTR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccctcaagaaactcacgtagagcaactaccagaatctgttgttgacgcacca
gtcgaagaacaacaccaagaaccacaggctccacaggctccagaggctccacaagttccc
caggaatccgctccacaggaatctcttccacaggaatccgctccacaagaaccactagct
ccacaagaacaacatgacgttcctccaccatccaatgctccggtttacgaaggcgaagaa
tctcatagtgtccaagactaccaacaggcccaccaacaccaccaaccacccgaaccccaa
ccatattatcctcctcctcctcctggtgaacacatgcacggtcgcccaccaatgcaccac
cgtcaagaaggtgaactttcgaatactaggttgtttgttagacctttcccattagatgtt
caagaatctgagttgaatgaaatctttggtccatttggaccaatgaaggaagtcaagatc
ttgaacggttttgcgtttgttgaatttgaagaagcagattctgctgccaaagctattgaa
gaagttaacggtaaaagttttgccaatcaacctttggaagttgtttactcgaaattgcct
gccaagagataccgtatcaccatgaaaaacttaccagaaggttgttcatggcaagatctt
aaagatttggccagagagaatagtctagaaactactttttctagcgtcaacaccagagat
tttgacggtactggtgctttagaattccctagtgaagagatcttggtcgaagccttggag
agattaaacaacatcgaattcagaggctctgtcattactgttgaaagagatgacaatcct
ccaccaatcagaagatcaaatagaggtggctttagaggccgtggtggctttagaggcggc
ttcagaggcggcttcaggggtggcttttctaggggcggctttggtggccccagaggtgga
tttggtggtccaagaggcggctacggtggctattccagaggcggctacggtggctactcc
aggggcggatacggtggctccagaggtggttacgatagccctagaggcggttacgatagt
ccaagaggcggttactccagaggcggctatggcgggccaagaaatgattacggtcctcca
agaggtagctacggtggttcaagaggtggttatgatggtccaagaggcgattatggtcct
ccaagagatgcatacagaaccagagatgctccacgtgaaagatctccaaccaggtaa
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