Saccharomyces paradoxus: SPAR_D06250
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Entry
SPAR_D06250 CDS
T08193
Name
(RefSeq) Ssn2
KO
K15165
mediator of RNA polymerase II transcription subunit 13, fungi type
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spao03021
]
SPAR_D06250
Transcription machinery [BR:
spao03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
SPAR_D06250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
54629871
NCBI-ProteinID:
XP_033765657
LinkDB
All DBs
Position
IV:complement(<1293660..>1297919)
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AA seq
1419 aa
AA seq
DB search
MSSDASTYRLEDVLSSFYRVEKIKKINYHQYISKTQSDQWSIQMEFMLRKQDPKNLVALL
SRDLWCFSINDDPVPTPPVIEHKPVSPDKVGTFTADYSKPNLPPHYALFLKALRRKIYIN
LALGSHNKLIQFGNACISLSGAPNYLVQLEPHLFVNGDLTISLCAKNMGLVPMKEENLEE
SFLLKHALYLAPSGIRMHLVPASKQGYLIKPPKHTELLLTTLSVSHGINLQNKKNLKWVA
VIPDLGHLNGHTPTIASYLTPLLEAKKLVWPLHLIFAQPVSDIENSASGDPSEFHSLQDA
LDAIDDFIQLKQTAAYRTPGSSGILSSNIAGTNPLSSDGAYTEQFQHYKNNSISSQPASY
HSVQETNKISPKDFSPNFTGIDKLMLSPSDQFAPAFLNTPNNNINENELFNDRKQTTVSN
DLENSPLKTELEMNGRSLEKINNSVSKTGSVDTIPNKEGTLEQQEQTENLSSDKSDSMVD
KELFGEDEDEDLFGDSNKSNSANESNKSISDEITEDMFEMSDEEENNNNKSIDSNNKEMR
SDLGKDMPFFPPSEKPNIRTMSGTTKKINGKRKYLDIPIDEMTLPTSPLYMDPGAPLPVE
TPRDRRKSVFAPLNFNPIIENNVDNKYKSGGKFSFSPLQKEEALNFDISTADLSSSEEEE
DDEEENGSSDEDLKSLNVRDDIKISDNISANNNIHEPQYINYSSIPSLQDSIIKQENFNS
GNDANIVGNKEGFNSIWKIPQNDIPQTESPLKTVDSSIQPIETNMKLALEDNNVTSNPSE
FASNTVNSEISNLPKDKSGIPEFTPADSNLPIESSSSLPFLLRHMPLASIPDIFITPTPV
VTISEKEQDILDLIAEQVVTDYNILGNLGIPKIAYKGVKDCQEGLVTTTMLQLFSTFDRL
NGNDTISKFYNMKQPYVFVKKHHELIKVKHDSQPFIKFLNFRPPNGIKNFKSLLLSSSFK
EDCLSFAPTLSQTYINQELGFCELLKLTNEDPPGLMYLKTFDKNKLLLLAAQIVSYCSNN
KNSIKSVPPILIILPLNNATLTELVDKANIFQVIRNEVCAKMPNIELFLKVIPMDFIRNA
LVTVDQYVDVAISIYNMLPPKSIKFTHIAHTLPEKVNFRTMQQQQKQQQQQQQQQNNSTG
SSSIIYYDSYIHLAYSRSVDKEWVFAALSDSYGQGSMTKTWYVGNSRGKFDDACNQIWNM
ALNLASKKYGKICLILTRLNGILPDDELMNWRRLSGRNIHLAVVCVDDNSKISFIDEDKL
YPSFKPIYKDTRFGGRMDMTRLDDYEIRDIDQDIHGVVFQHPFPLAHSQHRCAIRSGALI
KFKKCDGDTVWDKFAVNLLNCPHSDSTQLLETILEEFRNLAALNVWYGLSDGADGHIPWH
ILAVKKMMNTLVHTRVKIANTTTATGHTAPSSSITLLDK
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgacgcttccacatacagacttgaggatgtcttatccagcttctacagagta
gagaaaattaaaaagatcaactatcaccagtacatttctaaaacacaaagtgatcaatgg
tctattcaaatggaattcatgttgcggaagcaggacccaaagaatctagttgcactgctt
tcgagggatttgtggtgcttcagtataaatgatgatccggtaccgacacctcccgtgata
gaacataaaccagtgagcccagataaagtcgggactttcactgccgattattctaagcca
aacttaccgccacattatgctctttttttaaaagctctaagaagaaaaatttacattaat
ttggcattaggctcacacaataagctgatacaatttgggaatgcctgcatatcattgagc
ggagcgccgaattatctcgttcagttagaaccacacctttttgtaaacggagacctcaca
atatcgttatgtgctaagaatatgggcttagtaccgatgaaggaggagaatttagaagaa
tcttttcttctaaaacatgcactttatttagcaccatctggaataaggatgcatttagtg
cctgcttccaagcaaggatacttgatcaagccaccaaagcatactgagcttctcttgacg
acgttaagtgtatctcatggtataaacttgcagaataaaaaaaatttgaaatgggttgct
gttattcctgacttggggcaccttaacggccacacacctactatagcttcatatttaact
ccactacttgaagccaaaaaactggtatggccattgcatttaatcttcgctcagccagta
tccgatatagaaaattctgcttccggagatccatcagaatttcacagcttgcaagatgca
ctcgatgctattgacgattttatacaattaaagcaaacagctgcctataggactccagga
agctctgggattttgagcagtaacattgctggtacaaatcccttaagctcagatggtgca
tatacagaacagtttcaacattataagaacaactcaatcagttctcaacccgcttcttat
cattctgttcaagagactaataagatatctccaaaagacttctcccctaatttcacaggc
attgataaattgatgctatcaccaagcgatcaatttgctccagctttcttgaatactcct
aataataacatcaatgagaatgaactatttaatgatagaaaacagactacagtatcgaat
gatttggaaaacagcccactaaaaactgagctggagatgaatggcagatcactggaaaag
attaataattctgtgagcaagacaggaagcgtagacactattcctaataaagagggaaca
ctggaacaacaagaacaaaccgaaaatttgtcaagtgataaaagtgactctatggtagat
aaagaattgtttggtgaggatgaggacgaggatttatttggcgatagcaataaatcgaat
tctgcaaatgaatccaacaaaagtatatctgatgaaattaccgaagatatgttcgaaatg
tctgatgaagaagaaaacaataataataaaagcattgacagtaataacaaggaaatgcgt
tctgatcttggtaaagatatgccattttttccgccatctgagaaaccaaatattcgtaca
atgagcggaacaacaaaaaaaataaatggaaagagaaagtatttggatattccgatagat
gaaatgacattgcccactagtccgttatatatggacccgggtgcgccacttcctgtagaa
acacctcgcgatagacgtaaaagtgtgttcgctccgctgaattttaaccctataatagag
aacaatgttgataataaatacaaatccggagggaaattttcgtttagtccgttacaaaag
gaggaagcattgaactttgatatttccacagcagatctttctagctctgaagaagaagag
gatgatgaagaagagaatggtagcagtgatgaggacctcaagtcattgaacgttcgcgac
gacattaagatttccgataacatcagtgccaataataatattcatgagccccaatacata
aattattcttcgatcccaagtctacaagattcaatcataaagcaagaaaatttcaattcg
ggaaacgatgctaacatcgttggaaacaaggagggatttaattctatttggaagattcct
caaaatgatataccacagacggagtcaccactaaagactgttgattcatctattcaaccc
atagaaaccaatatgaagttggccctcgaagataacaatgtcaccagtaatccgtccgaa
tttgcgtcgaatacggtaaattcagaaatttctaacctaccaaaagacaagagcgggatc
cctgaatttacaccggcggactccaatttacccattgaatcatcaagtagcttacccttt
ctattgagacacatgccgctagcgtctataccggacattttcattacgcctactccagtt
gttacgatatcagaaaaggaacaagatattctagatttaattgcggaacaagtggtcact
gactataatattttgggaaacctaggaatcccgaagattgcttataaaggagtgaaagat
tgccaagaaggtttagtaacaactacgatgttgcagttattttccactttcgataggtta
aacggcaatgatacgatctccaaattctacaatatgaagcagccgtacgtttttgtgaag
aaacatcacgaactaatcaaagttaaacatgactctcaaccatttattaagtttctcaat
ttccgccccccaaacggcataaaaaacttcaaatctttattattgagctcatctttcaaa
gaagattgtctgtcatttgcaccaactctatctcaaacatatattaatcaagaattaggg
ttttgcgagctgcttaaactaaccaatgaagatccacccggactaatgtatttaaagaca
ttcgataaaaataagttattattgctagctgcacagattgtttcatactgttctaataat
aagaactccatcaaaagtgtaccaccaatattgataatattacccttgaataatgcaact
ctgaccgaattagtggacaaggcgaacattttccaagtgatcaggaacgaagtttgtgcc
aagatgcccaacattgaactatttttgaaagttattcctatggactttattagaaatgca
ctggtgacagtggatcagtatgttgatgtagcaatttctatatataacatgttaccgcca
aagtccataaagttcactcacattgcgcatactttaccagaaaaagtaaatttcagaacc
atgcagcaacagcaaaagcaacagcagcaacagcagcaacagcagaataacagtacagga
tcatcttctataatctattatgactcgtacatccacttggcgtattcgcgtagtgtagat
aaagagtgggtttttgcagctctgtcagatagctatgggcagggcagtatgacgaaaacc
tggtacgtcgggaattccaggggaaaatttgacgacgcatgtaaccaaatatggaatatg
gctctaaatttggcgtctaaaaaatacggaaaaatatgtctaattttaactagattgaat
ggcatactaccagatgacgaattaatgaattggagaagactatccggcagaaatatacat
cttgctgtggtatgcgttgatgacaactctaaaatctcattcattgatgaggataaatta
tatcctagcttcaagccgatctacaaagataccaggtttggagggcgcatggatatgacc
agattagacgactatgaaataagggacatagaccaggacatccatggtgtagtattccag
cacccatttcctctggcgcattcacagcatcgctgtgctatcaggagtggtgccttgatc
aaattcaagaaatgcgacggcgataccgtttgggacaaattcgcagtcaacctcctgaac
tgtccacattctgatagcacgcaattgctggaaaccatcctagaagagtttcgcaatcta
gctgccctaaacgtgtggtacggcctctctgatggcgcagatggtcacatcccatggcat
atcctagccgtgaaaaaaatgatgaacactcttgtgcacaccagagtcaaaattgctaat
actaccaccgccactggtcataccgccccttcttcatcaattactctcttggataaataa
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integrated database retrieval system