KEGG   Saccharomyces paradoxus: SPAR_E02450
Entry
SPAR_E02450       CDS       T08193                                 
Name
(RefSeq) Rad3
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
spao  Saccharomyces paradoxus
Pathway
spao03022  Basal transcription factors
spao03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SPAR_E02450
  09124 Replication and repair
   03420 Nucleotide excision repair
    SPAR_E02450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spao03021]
    SPAR_E02450
   03036 Chromosome and associated proteins [BR:spao03036]
    SPAR_E02450
   03400 DNA repair and recombination proteins [BR:spao03400]
    SPAR_E02450
Enzymes [BR:spao01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     SPAR_E02450
Transcription machinery [BR:spao03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     SPAR_E02450
Chromosome and associated proteins [BR:spao03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    SPAR_E02450
DNA repair and recombination proteins [BR:spao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     SPAR_E02450
SSDB
Motif
Pfam: HBB DEAD_2 Helicase_C_2 HsdM_C DUF5667
Other DBs
NCBI-GeneID: 54630230
NCBI-ProteinID: XP_033765988
UniProt: A0A8B8UQH4
LinkDB
Position
V:<517539..>519869
AA seq 776 aa
MKFYIDDLPVLFPYPKIYPEQYNYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ
IHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEV
SKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEK
LLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI
DNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILT
DQEEPYVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL
QHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLII
EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQ
KSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF
FPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLS
VARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMR
HAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLPKWIAQGLSDADLNLSTDMAISNTKQF
LRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRKDKGGFIESKNKEGEQDEDEDIEMQ
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgaagttttatatagatgatttaccagtgcttttcccttatcccaagatatatccggag
cagtataattatatgtgcgacattaaaagaaccctggatgtaggtggaaacagtatcttg
gagatgccttcaggaacaggtaaaaccgtctcattgctatctctcacaatcgcttaccag
atacactatcccgaacatagaaaaatcatatactgttctcgtactatgtctgaaatcgaa
aaagctttagtagaattggagaatctcatggattacagaactaaagaactgggctatcaa
gaggattttcgaggtcttggcttgacatcaaggaaaaatttgtgtctgcatcctgaagtg
agtaaggaacgaaaaggtacagtagtcgatgaaaaatgccgtagaatgacaaatggacag
gcgaagagaaaattggaggaagatccagaggccaatgtagaattgtgtgaataccatgaa
aatttgtacaatattgaagtagaagattatctaccaaagggcgtattttcttttgaaaaa
cttttgaagtactgcgaagaaaaaacactttgtccatattttattgttcgtcgtatgatt
tctctttgtaacattattatttattcttaccattatctattagatcctaaaattgctgaa
agagtttccaacgaggtttcaaaagatagcattgtcattttcgatgaggcacacaatatt
gataatgtgtgtattgaatccctgtcgttagacttgacaacagatgcattgagaagagcc
acacgaggtgctaatgcgttagatgaacgtatttccgaggtgagaaaggttgactcgcag
aaactacaggatgaatacgaaaaactagttcaaggtctgcattctgcagatattcttacc
gaccaggaagagccatatgtggaaacgcctgttttgccccaagatcttctaactgaagca
atcccggggaatatacggagagctgaacattttgtttcatttttaaagaggctgatagaa
tatctgaagaccagaatgaaagttcttcatgttatttcagaaacaccaaaatcgtttctg
cagcatttaaaacaattaacttttatagaacgaaaaccccttcgcttttgttcagaaagg
ttatcattgcttgtaagaactttagaagttacagaggtagaagatttcactgcattgaaa
gacatagcgacatttgctacgcttatatcaacatatgaggaagggttcttgctgattatt
gaaccatatgaaattgaaaatgctgcagttccgaatccgattatgagatttacttgctta
gatgcatcgattgccattaaaccagtcttcgagaggttttcctctgttattatcacttcg
gggactatatcaccattagacatgtatccaagaatgttaaactttaaaacagtcttacaa
aaatcatacgccatgaccctagcgaaaaaatcattcctaccaatgattattaccaagggc
tccgatcaagttgcaatttcttcaagatttgaaattagaaacgatcctagtattgttcgt
aattacggctctatgttagttgaatttgccaagattacgcccgatggaatggttgtgttt
ttcccctcatatctgtatatggaaagtattgtttcgatgtggcaaacaatgggtattctt
gacgaggtttggaagcataaattaattctagttgagactcctgatgctcaagaaacatct
ctagctctggagacctacagaaaagcctgctcaaacgggcgtggtgcaattttgctttct
gttgctagaggcaaggtatctgaaggtatcgattttgatcatcaatatggcagaaccgtg
ttgatgataggtatcccgtttcaatacacagaatcacgcattttgaaagctcgtttagaa
ttcatgagggaaaattatcgcatcagagaaaatgacttcttatcttttgatgcaatgaga
catgcggcgcaatgtttggggagagttctaagagggaaggacgattatggtgtaatggta
ctggcagaccgtagattttcaagaaaaagaagtcagttaccaaaatggattgctcaaggt
ttgtcagatgctgacttaaacctttcaaccgacatggccatatccaataccaaacaattc
ttaagaacgatggctcaaccgacagatcctaaagaccaagaaggtgtatctgtttggagt
tatgaagatttgataaagcaccaaaatagcagaaaagacaagggtggatttattgaaagc
aaaaacaaagaaggagaacaggatgaagatgaagatatagaaatgcagtga

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