Saccharomyces paradoxus: SPAR_E02450
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Entry
SPAR_E02450 CDS
T08193
Name
(RefSeq) Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03022
Basal transcription factors
spao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPAR_E02450
09124 Replication and repair
03420 Nucleotide excision repair
SPAR_E02450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spao03021
]
SPAR_E02450
03036 Chromosome and associated proteins [BR:
spao03036
]
SPAR_E02450
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_E02450
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SPAR_E02450
Transcription machinery [BR:
spao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SPAR_E02450
Chromosome and associated proteins [BR:
spao03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SPAR_E02450
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SPAR_E02450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
HsdM_C
DUF5667
Motif
Other DBs
NCBI-GeneID:
54630230
NCBI-ProteinID:
XP_033765988
UniProt:
A0A8B8UQH4
LinkDB
All DBs
Position
V:<517539..>519869
Genome browser
AA seq
776 aa
AA seq
DB search
MKFYIDDLPVLFPYPKIYPEQYNYMCDIKRTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ
IHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPEV
SKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFEK
LLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHNI
DNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADILT
DQEEPYVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL
QHLKQLTFIERKPLRFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLII
EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQ
KSYAMTLAKKSFLPMIITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF
FPSYLYMESIVSMWQTMGILDEVWKHKLILVETPDAQETSLALETYRKACSNGRGAILLS
VARGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEFMRENYRIRENDFLSFDAMR
HAAQCLGRVLRGKDDYGVMVLADRRFSRKRSQLPKWIAQGLSDADLNLSTDMAISNTKQF
LRTMAQPTDPKDQEGVSVWSYEDLIKHQNSRKDKGGFIESKNKEGEQDEDEDIEMQ
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttatatagatgatttaccagtgcttttcccttatcccaagatatatccggag
cagtataattatatgtgcgacattaaaagaaccctggatgtaggtggaaacagtatcttg
gagatgccttcaggaacaggtaaaaccgtctcattgctatctctcacaatcgcttaccag
atacactatcccgaacatagaaaaatcatatactgttctcgtactatgtctgaaatcgaa
aaagctttagtagaattggagaatctcatggattacagaactaaagaactgggctatcaa
gaggattttcgaggtcttggcttgacatcaaggaaaaatttgtgtctgcatcctgaagtg
agtaaggaacgaaaaggtacagtagtcgatgaaaaatgccgtagaatgacaaatggacag
gcgaagagaaaattggaggaagatccagaggccaatgtagaattgtgtgaataccatgaa
aatttgtacaatattgaagtagaagattatctaccaaagggcgtattttcttttgaaaaa
cttttgaagtactgcgaagaaaaaacactttgtccatattttattgttcgtcgtatgatt
tctctttgtaacattattatttattcttaccattatctattagatcctaaaattgctgaa
agagtttccaacgaggtttcaaaagatagcattgtcattttcgatgaggcacacaatatt
gataatgtgtgtattgaatccctgtcgttagacttgacaacagatgcattgagaagagcc
acacgaggtgctaatgcgttagatgaacgtatttccgaggtgagaaaggttgactcgcag
aaactacaggatgaatacgaaaaactagttcaaggtctgcattctgcagatattcttacc
gaccaggaagagccatatgtggaaacgcctgttttgccccaagatcttctaactgaagca
atcccggggaatatacggagagctgaacattttgtttcatttttaaagaggctgatagaa
tatctgaagaccagaatgaaagttcttcatgttatttcagaaacaccaaaatcgtttctg
cagcatttaaaacaattaacttttatagaacgaaaaccccttcgcttttgttcagaaagg
ttatcattgcttgtaagaactttagaagttacagaggtagaagatttcactgcattgaaa
gacatagcgacatttgctacgcttatatcaacatatgaggaagggttcttgctgattatt
gaaccatatgaaattgaaaatgctgcagttccgaatccgattatgagatttacttgctta
gatgcatcgattgccattaaaccagtcttcgagaggttttcctctgttattatcacttcg
gggactatatcaccattagacatgtatccaagaatgttaaactttaaaacagtcttacaa
aaatcatacgccatgaccctagcgaaaaaatcattcctaccaatgattattaccaagggc
tccgatcaagttgcaatttcttcaagatttgaaattagaaacgatcctagtattgttcgt
aattacggctctatgttagttgaatttgccaagattacgcccgatggaatggttgtgttt
ttcccctcatatctgtatatggaaagtattgtttcgatgtggcaaacaatgggtattctt
gacgaggtttggaagcataaattaattctagttgagactcctgatgctcaagaaacatct
ctagctctggagacctacagaaaagcctgctcaaacgggcgtggtgcaattttgctttct
gttgctagaggcaaggtatctgaaggtatcgattttgatcatcaatatggcagaaccgtg
ttgatgataggtatcccgtttcaatacacagaatcacgcattttgaaagctcgtttagaa
ttcatgagggaaaattatcgcatcagagaaaatgacttcttatcttttgatgcaatgaga
catgcggcgcaatgtttggggagagttctaagagggaaggacgattatggtgtaatggta
ctggcagaccgtagattttcaagaaaaagaagtcagttaccaaaatggattgctcaaggt
ttgtcagatgctgacttaaacctttcaaccgacatggccatatccaataccaaacaattc
ttaagaacgatggctcaaccgacagatcctaaagaccaagaaggtgtatctgtttggagt
tatgaagatttgataaagcaccaaaatagcagaaaagacaagggtggatttattgaaagc
aaaaacaaagaaggagaacaggatgaagatgaagatatagaaatgcagtga
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