Saccharomyces paradoxus: SPAR_E02460
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Entry
SPAR_E02460 CDS
T08193
Name
(RefSeq) Brr2
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAR_E02460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spao03041
]
SPAR_E02460
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPAR_E02460
Spliceosome [BR:
spao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SPAR_E02460
Complex C
U5 SnRNP specific factors
SPAR_E02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
BRR2_plug
ResIII
Helicase_PWI
Helicase_C
nSTAND3
AAA_22
DEXQc_Suv3
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
54630231
NCBI-ProteinID:
XP_033765989
UniProt:
A0A8B8UQE9
LinkDB
All DBs
Position
V:complement(519989..526483)
Genome browser
AA seq
2164 aa
AA seq
DB search
MTEHETRDKVKKIREIYRYDEMSNKVLKVDKRFMNISQNPQRDAEISQPKSMSGRISAKD
MGQSLRSNVNKEIKESDVAVEKTEKSTSLRKIQQHSTILNSSSNFRLHYYPKSPSNVEVY
EQVLLWVTEVLGNDIPHDLIIGTADILIKQLKENEENGDGNIEKRKEKIQDELGININTP
KFTELVKLMKNLTDYEIHPDKTDKQAVAILADDEKSDEEEVAELSNNTNVLEREINDDDE
EEEEEYDHNGVEVNLKTTNNRALPNIENDIIKLSDDKRSNIESIPIYSIDEFFLQRKLRS
ELDYKDTSAIQDLSEKILHEIKSYERNPVALEQKLVYLLDFENIPLAEFILKNRSAIFWG
IRLAKSTENEIPNVIEEMVVNGLDDLVEQYKFRNTAFAKRELDSGDDQPQSSEAKRTKFS
NPAIPPVVDLEKIRFDESSKLMTVTKVSLPEGSFKRVKPQYDEIHIPAPKKPVIDYELKE
IASLPAWCQEAFPSSETMSFNPIQSKVFNAAFEGDSNMLICAPTGSGKTNIALLTILKAL
SHYYNPTTKSLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDSRLSRKQI
EETQILVSTPEKWDITTRNSNNLAIVELVHLLIIDEIHLLHDERGPVLESIVARTFWASK
YGQECPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSFRPCPLSQQFCGIKERNSLKKL
KAMNDVCYEKVLESINEGNQIIVFVHSRKETSRTATWLKKKFMEENIAHKLTKNDSGSKQ
ILKTEAANVIDPSLRKLIESGIGTHHAGLARNDRSLSEDLFADGLLQVLVCTATLAWGVN
LPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIIITDQSNIQYYL
SVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRSDAVNWLSYTYLYVRMLASPTLYKIPD
ISEDRQLKKFRESLIHSALGILKEQELVLYDAENDVVEATDLGNIASSFYINHASMNVYN
RELDEHTTQIDLFRIFAMSEEFKYISVRYEEKRELKQLLEKAPIPIREDIDDPLAKVNVL
LQSYFSQLKFEGFALNADMVFIHQNAGRLLRAMFEICLKRGWGHPTRMLLNFCKSATTRM
WPTNSPLRQFKKCPVEVIKRLEASTVPWGDYLQLETPAEVGRAIRSEKYGKQVYDLLRRF
PKISVTCNAQPITRSVIRFNVEIIADWMWDMKIHGSLQPFLLMLEDTDGDSILFYDLLFI
TPDMMGREFTFSFTHELKQHNQNNLPPNFFLTVISENWWHSESEIPVSFSGFKLPNKFPP
PTPLLENINISTSELGNDDFSEVFGFKTFNKIQSQVFESLYNSNDSVFVGSAKGSGKTAI
AELALLNHWRQNKGRAVYINSSEKKIDAVLSEWNKRLSHLAGGKTINKLGNDPSLNLRLL
AKSHVLLATPVQFELLSRRWRQRKNIQSLELVIYDDAHEISQGVYGAVYETLISRMIFIA
TQLEKKIRFVCLSNCLANARDFGEWAGMTKSNIYNFSPSERVEPLEINIQSFKDVEHISF
NSSMLQMAFEASAAAAANRNSSSVFLSSRKDCVEVASAFMRFSKAIQWDMLNAEEEQVVA
YVEKLTDSHLRAPLKHGVGILYKGMAPNDERIVKKLFEYGAVSVLLISKDCSAFACKTDE
VIILGTNFYDGAEHKYMSYTINELLEMVGLANGNDSMAGKVLILTSHNMKTYYKKFLIEP
LPTESFLQYIIHDTLNNEIANSIIHSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPYGI
SVFLTNLVETSLNDLVESSFIEIDDTETETKAEVKGGDDEATEMISALNNGLIASHYGVS
FFTIQSFVSSLSNTSTLKDMLYVLSTAVEFESIPLRKGDRALLVRLSKKLPLKFPGDASS
DSVSLKVFLLLQAYFSRVELPVDFQNDLRDILEKVVSLINVVVDILSANGYLNATTAMDL
AQMLIQGVWDVDNPLRQIPHFNNKILEKCKEINVETVYDIMALEDDERDEILTLTGSQLA
QVAAFVNNYPNVELTYSLNNSDSLTSGAKQKITIQLTRDVEPESLQVTSEKYPFDKLEGW
WLVLGDVSEKELYAIKKVTLNKETQHYELEFDTPTSGKHNLTIWCVCDSYLDADKELSFE
INVK
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcacgaaacgagggataaggtcaaaaaaattagagagatctatcgttatgat
gagatgtccaataaggtgttgaaagtcgataagcgctttatgaatatcagccaaaatccc
cagagggacgcggaaatatcacagccaaagtctatgagtggcagaattagtgctaaagat
atggggcagagcctgcgcagtaatgttaataaggaaataaaagaaagtgatgtcgctgtg
gaaaaaactgaaaagagcacatctttaagaaaaatccaacagcatagtaccattttgaac
tcctcctccaatttcaggttacactattatccaaagagtccctcaaatgttgaagtttac
gagcaggttttgctgtgggttacagaagttttaggtaatgatataccccatgaccttatt
attggaactgcagacatacttatcaaacaattgaaagaaaatgaagaaaatggagacggt
aatattgaaaagcgaaaggaaaagatccaggatgagttgggcatcaatataaatacccca
aagtttaccgagttagtcaaacttatgaaaaaccttaccgattatgaaattcatcctgac
aaaaccgataagcaagcagtggcgattcttgccgatgatgaaaaatcagatgaggaagaa
gtggcagaactgtctaataacaccaatgttcttgagagagaaatcaacgatgatgatgag
gaggaggaggaggaatatgatcataatggcgttgaagtcaacctcaaaacaacgaataac
agggcattgccaaatattgaaaacgatataatcaagctttctgatgataaaagaagtaat
attgagagcattccgatatattcaattgatgaattctttttgcagagaaaacttcggtcg
gagcttgattataaggatacttctgcaatacaagacctttcagagaagattttgcatgag
attaaaagttatgagcgtaatccagtagcgttggagcagaagttggtttatctgcttgac
ttcgagaatataccactggctgaatttattcttaagaatagatctgcaatcttttggggc
atacggctagcaaagagcacagagaatgaaataccgaacgtaatagaggaaatggttgta
aatggcttggacgatcttgttgaacagtacaaatttagaaacactgctttcgcaaagcgt
gaacttgattctggtgacgatcagccacagtcttcggaagcaaaaaggacaaaattcagt
aatccagcaataccgcccgttgtagatttggaaaagattaggtttgatgaaagttctaaa
ttaatgaccgttacaaaagtatccctgccggaaggatcgttcaaaagagtgaaaccacag
tatgacgaaatacatattccagccccgaagaagcctgttattgattatgagttgaaagaa
attgcttctttgccagcttggtgtcaggaggcgtttccttcatcggaaacaatgtcattc
aatcctatacaatcaaaggtctttaacgcagcattcgaaggtgattcaaacatgttaata
tgtgcgcctactggttcaggtaagactaatattgctttattaactatattgaaagctttg
tcccattattataacccgacaacgaaaagcttgaacctttctgcgtttaaaattgtttat
atagcacctttgaaagcattagtgcaggaacaagtgcgagaatttcaaaggagattggcc
tttttaggaataaaagttgctgaattgactggtgattctaggcttagcagaaaacaaatt
gaagagacgcaaattttagtttctacgccagagaagtgggacataactactagaaattca
aataatctggctatcgtagaactagttcatttgttgattatagatgaaatacacttgttg
catgatgaaagaggaccagtgttggagagtattgtcgctagaacattttgggcttccaaa
tatggccaggagtgcccgagaattataggtctttctgcaactttaccaaattatgaggat
gtcgggaggtttttaagggttcctaaggaaggattattttattttgattcctcatttaga
ccatgtccactatctcaacagttttgtggaatcaaggaacgaaactccttgaaaaagctg
aaagctatgaacgatgtttgttatgagaaggttttagaatccatcaatgaaggcaatcaa
ataatcgtgtttgttcactcacgaaaagaaacatcacgaacagcgacatggttaaagaag
aagtttatggaagagaacattgctcataaactaaccaaaaatgattcaggatcgaagcag
attttaaagacagaagctgcgaacgtgattgatccaagtctaagaaaattaattgaaagt
ggtatagggacgcatcacgccgggctggctaggaatgacagatctctatctgaagatctg
tttgctgacggattattgcaagtattggtgtgcactgcgacgttggcatggggtgttaat
ctccctgctcatacagttattataaaaggaacagatgtttattcacctgaaaaggggtcc
tgggaacaactttctccacaggacgtacttcaaatgttaggtagagcaggtagaccgagg
tatgacacatttggggaaggtattataataacagatcaatcaaacattcaatattatctc
tcggttttaaatcagcaattgcccatagaatcacaattcgtttcaaaattggttgacaat
ttaaatgctgaagttgtcgctggtaatattaaatgcagaagtgatgctgtaaattggttg
tcgtatacttacttatatgtcagaatgttagcttcccctacgctttataaaatacctgat
atttcagaagataggcaattgaaaaagtttagagaaagtttgattcattcagccctaggc
attttgaaagaacaagagttggtgttatacgatgctgaaaacgatgtggttgaggcaaca
gatctaggaaatatagcgtcgtcattttacataaaccatgcatctatgaatgtttacaat
agagagttagatgaacacacaacacagattgatctttttagaatatttgcaatgtcagaa
gagtttaagtacatatcggtaagatacgaagagaagagagaactgaaacaacttctagaa
aaagctcctattcctattagagaagacattgatgatccattagcaaaagtgaacgttcta
ctgcaatcttatttttcccagctaaagttcgagggttttgcactaaatgctgatatggtt
tttattcaccaaaatgcgggtaggctattacgtgctatgtttgaaatatgcttgaagaga
gggtggggacatcctacgcggatgttgctaaatttttgtaagtctgccacaacgagaatg
tggccaacaaactctcctttaagacagttcaaaaaatgtcctgttgaggtcattaaaagg
ctggaagcttccacagtaccatggggagattatctacaactagaaacacctgccgaagtt
ggccgtgcaatcagatctgaaaaatatgggaagcaggtttacgatttattgagaaggttt
cctaaaatatccgtaacatgtaatgctcagcctattactcgtagcgttataaggttcaac
gttgaaataatagccgactggatgtgggatatgaaaatacatggttcccttcaacctttt
ttgctcatgctagaagatactgatggcgattcgatacttttttatgacctactatttatc
actccagatatgatggggcgggaatttaccttttcctttactcacgagttaaagcagcac
aatcaaaataacttaccacctaatttcttccttactgtgatatctgaaaactggtggcat
agtgaatccgagattccagtttccttcagtggttttaagcttccgaataaatttcctcct
cccactccccttctggagaatattaatatttcaacatcagagcttggcaacgatgatttt
tccgaagtatttggattcaaaactttcaacaagatccagagccaggttttcgaatctctc
tacaattcgaatgactcggtgtttgtaggttcagcaaagggctcgggtaaaacggccata
gctgaattagcgttgctaaatcactggagacagaataaaggaagagcggtttatatcaat
tcgtctgaaaaaaaaattgatgctgtgctatccgagtggaataaaaggttatctcatctt
gctggtggaaagaccattaataagctgggaaatgatccttcactaaatttaagactatta
gcaaaaagtcatgttctcttggctacccctgtgcaatttgagcttttgtcacgtcgctgg
aggcaaagaaaaaacatccaaagtttagaattggtgatatatgatgacgctcatgagatt
agtcaaggtgtttatggtgcagtctatgaaacgctaatttccagaatgatatttatagct
acccaacttgaaaagaaaattcgatttgtttgcctgtcgaattgtttggcaaatgctcgt
gattttggtgaatgggctggtatgacaaagtcaaacatatataacttttctccaagcgaa
agagttgaacctctcgaaataaacattcagtcatttaaagatgttgaacacatatcgttc
aattcttcgatgcttcaaatggcatttgaagcatctgctgctgctgcggcaaatcgaaat
tctagctcggtgttcctatcatccagaaaagattgtgttgaagttgcgtctgcatttatg
aggttttcaaaagcaatacaatgggatatgttgaatgccgaagaagagcaagtcgtagcg
tacgttgaaaaattgacagatagccatttaagggcgcctttaaaacatggtgtgggtatt
ctgtataaggggatggcaccaaatgacgaaagaatcgtaaaaaagttattcgaatacggt
gcagtatcagttttactcatttctaaggattgctccgctttcgcttgtaaaactgatgaa
gtgattatactagggaccaacttttacgatggtgcagagcataaatatatgtcatatacc
ataaatgaacttttagaaatggtgggactagctaatggtaacgattcaatggctggtaag
gttttaattttgacgagtcacaacatgaagacctactacaagaagtttttaattgagccc
ctgcctactgagagttttttacagtatatcattcatgatactttgaacaacgagattgca
aattctattatacacagcaaacaagattgtgttgactggtttacttattcgtatttctat
cgccgtatccatgtgaatccaagctattatggtgtaagggatacatccccatatggcatt
tcagtttttttaaccaatctagttgaaaccagtttgaacgacttggttgaatcatctttt
attgagattgatgatacagaaactgaaacaaaagcagaagttaaaggaggagatgatgaa
gcaactgaaatgatctctgccttgaataacgggttgattgcttctcattatggtgtatcc
tttttcactattcagtcattcgtttcctctttatcgaatacgtcaacacttaaagatatg
ttgtatgttctttccacagcggttgaattcgaaagtatcccacttagaaagggcgacaga
gcattacttgtcagattaagtaaaaaactaccattaaaatttcctggcgacgcttcttct
gattctgtgagcttgaaagttttcctgttgttacaagcgtatttttcacgtgttgaatta
cctgtagactttcaaaatgatttaagagacattttagaaaaggtcgtttcattaattaac
gttgtggttgatattctttcagcaaacggatatttgaatgccactaccgccatggacttg
gcgcagatgttgattcaaggtgtatgggatgttgataacccgctgaggcagatcccgcac
ttcaacaataagattctggaaaaatgtaaagaaattaacgttgagacggtttatgatata
atggctcttgaggacgatgagagggatgaaattctaacgctcactggttcacagcttgct
caggtcgccgcgtttgtcaacaattaccccaacgttgaacttacttattcgttgaataat
tctgattccttaacttcaggtgcaaaacaaaaaattaccattcaattaacaagagatgtt
gaacctgaaagtttgcaagtaacttccgaaaagtatccatttgataaactagaaggttgg
tggttagttttaggtgacgtctctgaaaaggaactttatgctatcaagaaagttacttta
aataaggagactcaacactatgaattagaatttgatactccgacatctggtaaacataac
ttaaccatttggtgcgtctgtgattcatatcttgacgcagataaagaattgtcatttgag
ataaatgtgaagtaa
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integrated database retrieval system
