Saccharomyces paradoxus: SPAR_G00820
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Entry
SPAR_G00820 CDS
T08193
Name
(RefSeq) Rok1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_G00820
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPAR_G00820
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
Helicases
SPAR_G00820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Fim1F_C
Motif
Other DBs
NCBI-GeneID:
54630476
NCBI-ProteinID:
XP_033766204
UniProt:
A0A8B8UR29
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Position
VII:181515..183212
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AA seq
565 aa
AA seq
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MDIFRVLTRGASVKKESGPKAKAADYSVINGKDGNQKEDNNESQIVKELDFFRNKRIISK
VEDDREKKTVNDSSDKGNESANDDEDLIKPVITNTAEASALRKSYKGNVSGTDVPLPIGS
FEDLISRFSLDRRLLNNLIENGFTEPTPIQSECIPFALNNRDVLACGPTGSGKTLAFLIP
LVQQIIDDKQTSGLKGLIISPTKELANQIFIECFKLSHKIFLEKKRPLQVALLSKSLGAK
LKNKGVSDKKYDIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFDKTFVEQSDDILS
ACKEPALRKAMFSATIPSSVEEIAQSIMMDPIRVIIGHKEAANTNIEQKLIFCGNEEGKL
IAIRQLVQEGEFKPPIIIFLESITRAKALYHELMYDRINVDVIHAERTALQRDRIIERFK
SGELWCLICTDVLARGIDFKGVNLVINYDVPGSSQAYVHRIGRTGRGGRSGKAITFYTKQ
DSVAIKPIINVMKQSGCEVSEWMDKMAKMTKKEKDSIKNGKAHTERKQITTVPKIDRAKR
RRQQEMIAASKRRKNEELSKKDLSK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacatttttagagtattgactagaggagcttccgtgaagaaagagtcgggcccaaaa
gccaaggcagcagattatagtgttataaatggaaaggatgggaatcaaaaggaagataat
aatgaaagccagatcgtgaaagaacttgatttctttcgaaacaaaagaattattagcaag
gtagaggatgatagggagaagaagacggtaaatgattcctcagacaaagggaatgagagc
gccaatgatgatgaagatctgataaaaccagtgattaccaataccgctgaggcatccgct
ttaagaaaatcatacaagggtaatgtatcaggtacagatgttccactaccaataggttcg
tttgaagatttaatttctaggttttcattggatagacgtttactaaataacttgattgaa
aatgggtttactgagcctactccaatccaaagtgaatgcattccctttgctctaaataat
agagacgttttggcatgtggtcccactgggtctggtaagacgttagccttcttgattccg
ctggttcagcaaattattgatgacaagcaaacttcggggttgaaaggtttgatcatttca
cctacaaaagaactagcaaaccaaatttttatcgaatgttttaaactatctcataagata
tttttggaaaaaaagaggcctctgcaagtcgctctgttatctaaatctttaggcgctaaa
ttgaaaaacaaaggagttagtgataagaaatatgacataattatttctaccccattaaga
ctaattgatgttgtcaaaaatgaggcccttgatctttccaaagttaaacatttgattttc
gatgaagctgataaactgttcgacaaaacgtttgttgaacaaagtgacgatattctgagc
gcctgtaaagagccagcgttgcgtaaagcgatgttttctgcgactattccatccagtgtg
gaagagattgcacaaagtataatgatggatcccattagagttattataggccacaaggaa
gcagcaaatacaaatattgaacaaaaattaatattttgcggtaatgaagagggtaaacta
attgctattagacagctcgttcaagaaggtgagttcaaaccaccaatcataatattttta
gagtctattacaagagcaaaagcattatatcatgaactgatgtacgacagaattaacgtg
gatgtgattcatgcagaaagaacagccttgcaaagggatagaattattgaacgattcaag
tctggcgagttatggtgtttgatctgtaccgatgttttagctcgtggtattgatttcaaa
ggtgttaatctggtcataaattatgatgttccaggatcttctcaggcttatgttcataga
atcggtagaacaggtagaggtgggcggtcaggtaaagctatcacattctatactaagcaa
gattcagtagccatcaaaccgataataaatgttatgaaacaaagtggttgtgaagtatct
gaatggatggataagatggctaaaatgaccaaaaaggagaaagacagtataaagaacggt
aaagcgcatacagaaagaaagcagattactactgtgcctaagatcgatagggccaaaaga
agacgtcaacaagaaatgatagcagcatctaaaagaagaaaaaacgaagaactctcaaag
aaagacctctcgaaataa
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