Saccharomyces paradoxus: SPAR_G03340
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Entry
SPAR_G03340 CDS
T08193
Name
(RefSeq) Spt6
KO
K11292
transcription elongation factor SPT6
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spao03021
]
SPAR_G03340
03036 Chromosome and associated proteins [BR:
spao03036
]
SPAR_G03340
Transcription machinery [BR:
spao03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SPAR_G03340
Chromosome and associated proteins [BR:
spao03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
SPAR_G03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Spt6_S1
Tex_central_region
SPT6_acidic
SH2
HHH_9
Tex_YqgF
RGS
Motif
Other DBs
NCBI-GeneID:
54630728
NCBI-ProteinID:
XP_033766456
UniProt:
A0A8B8URZ8
LinkDB
All DBs
Position
VII:700846..705201
Genome browser
AA seq
1451 aa
AA seq
DB search
MEETGDSKLVPRDEEEIVNDNDETKAPSDEEEGEDVFDSSEEDEDIDEDEDEARKVQEGF
IVNDDDENEDLGTSISKKRRKHKRREREEDDRLSEDDLDLLMENAGVERTKASSSSGKFK
RLKRVGDEGNVAESESDNVAVSRQDSTSKLEDFFSEDEEEDESGLRKGRNNEYGRDEEDH
GDRNRTADKGGILDELDDFIEDDEFSDEDDETRQRRIQEKKLLREQSTKQPTQITGLSSD
KIDEMYDIFGDGHDYDWALEIENEELENGNENNEAEEEEIDEETGAVKSAKKKISLQDIY
DLEDLKKNLMTEGDMKIRKTDIPERYQELRAGITDYGNMSSEDQELERNWIAEKISVDKN
FDANYDLTEFKEAIGNAIKFITKENLEVPFIYAYRRNYISSREKDGFLLTEDDLWEIVSL
DIEFHSLVNKKDYVQRFYEELHIDDSIVSEYFKNQNTASIAELNSLQDIYDYLEFKYANE
INEMFINHTGKTGKKHLKNSSYEKFKASPLYQAVSDIGISAEDVGENIGSQHQIHPPVDH
PSSKPIEVIESILNANSGDLQVFTSNTKLAIDTVQKYYSLELSKNTKIREKVRSDFSKYY
LADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRRDPDVFLRMVEAESLNLLSVKLHMS
SQAQYIEHLFQIALETTNTSDIAIEWNNFRKLAFNQAMDKIFQDISQEVKDNLTKNCQKL
VAKTVRHKFMTKLDQAPFIPNVREPKIPKILTLTCGQGRFGADAIIAVYVNRKGDFIRDY
KIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGINGPNPKTQKFYKKLQEVLHKKQIVDSR
GHTIPIIYVEDEVAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLSGEEVK
SLSIHPHQNLLSSEQLSWALETSFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAI
DFLQSLQRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTR
IHPEDYHLATKVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAE
ELEKNTGLRKLNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPV
RVERFWHNDIVCTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITA
EVSLLDHDVKQQYVPISYSKDPSIWDLKQELEDAEEERKLMMAEARAKRTHRVINHPYYF
PFNGRQAEDYLRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLALGK
VLVVDNQKYNDLDQIIVEYLQNKVRLLNEMTSSEKFKSGTKKDVVKFIEDYSRVNPNKSV
YYFSLNYDNPGWFYLMFKINANSKLYTWNVKLTNTGYFLVNYNYPSVIQLCNGFKTLLKS
NSSKSRMNNYR
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggaagagacgggagattcgaagctggtccctagggacgaagaagaaatagtaaatgac
aacgatgaaactaaagcgcctagtgatgaagaagagggagaagatgttttcgactcctct
gaagaggatgaagacattgatgaagatgaagatgaagcaagaaaagtgcaagaaggcttc
attgttaatgatgatgatgaaaatgaagacttaggaacaagcatttctaaaaaaagaaga
aagcataaaagaagagaaagggaagaagatgatcgactatccgaagatgatttggacctg
ttgatggaaaatgctggtgttgaacgtaccaaagcgagctcctcttcagggaaattcaaa
aggttaaagagggtaggagatgaaggaaacgtcgcagaatcagaaagtgacaatgtcgct
gtttcaaggcaagattctacctccaaattggaggatttcttttccgaagacgaagaagaa
gatgaatctggtttgcgtaaaggtagaaataatgaatatgggcgtgatgaagaagaccat
ggggatagaaacagaacagccgataaaggtggaatattggatgagttggatgatttcatt
gaagatgatgaattttctgatgaggacgatgaaactagacaaagaagaatccaagaaaag
aagcttttaagagaacaatccaccaagcaacctacacagatcactggtctatcgtcggat
aagatcgacgaaatgtatgacatttttggtgacggtcatgactacgattgggccttagaa
attgaaaatgaggaattagaaaatggtaacgaaaacaatgaagctgaagaagaagaaatc
gatgaagaaactggcgctgtaaaaagcgctaagaaaaaaatatctctacaagacatttat
gacttagaggatttgaaaaagaacttgatgactgaaggagacatgaaaattagaaagaca
gatattccagaaagataccaagaattaagagcaggcattactgactacggaaatatgtca
tccgaggatcaagagttggaaagaaactggatagcagaaaaaatttctgtagataaaaac
ttcgatgccaattatgatctcactgaattcaaagaagcgattgggaacgcgatcaaattc
atcaccaaagaaaacttggaagttccttttatttatgcttaccgtcgtaactacatttct
tcaagagaaaaagacgggtttcttttgactgaagatgacctttgggaaattgttagcctt
gacattgaatttcacagtcttgtaaacaaaaaggattatgttcagagattttatgaggaa
ttacacatcgacgattctattgtcagtgaatactttaaaaatcagaatactgcatccatc
gctgagctgaattctctacaggatatatacgactacctggaattcaagtatgccaatgaa
attaacgaaatgtttataaatcacaccggaaaaaccggtaagaaacatttgaaaaattcc
agttatgaaaaattcaaagctagccctctttatcaagcggttagtgatattggtatatca
gctgaggatgttggtgaaaatattggttcacagcatcaaatccaccctcctgtagatcac
cctagttccaaaccaatagaagtgatagaatctatattgaatgccaacagcggtgatttg
caagtctttacgtccaatactaaactagcaattgatacagtccaaaaatattactctttg
gaattgtctaagaatacgaagataagggaaaaagttagatctgatttttccaaatattat
ctggctgacgttgtgttaactgctaaaggtaaaaaagagattcaaaagggatctttatat
gaggatataaaatatgctatcaatagaactccaatgcactttcgtagggatccagatgtt
ttcctgagaatggtcgaggcagaatctttgaatttgctcagtgttaagttacacatgtca
tcgcaagctcaatacatagagcacttattccaaattgctcttgaaaccactaatacctcg
gatatcgcgattgaatggaataacttccgtaaactggcattcaaccaagcaatggataag
attttccaggatatatcccaggaagttaaagacaatttaacaaaaaattgtcaaaaattg
gtcgccaagactgttcgtcataaatttatgacaaaattggaccaagctccgttcattcct
aatgtcagagagccaaaaattccaaaaatcttaactttaacttgtggccagggtaggttc
ggagccgatgctattattgctgtttacgtcaacagaaagggtgatttcataagagattac
aagattgtcgacaatccatttgataagacaaatcctgaaaaatttgaagataccttggat
aatatcattcaaagttgtcagccgaatgccatcggcatcaatggtcccaaccccaagact
caaaaattttacaaaaaattacaagaagttctgcataagaaacaaattgtcgacagtaga
ggacatactattccaatcatctacgttgaggacgaagtcgctattcgctaccagaattct
gaaagagctgcccaagaatttccaaacaaaccccccctagttaaatactgtatcgccttg
gcgcgttatatgcattctccattgttggaatatgctaatttatcaggtgaagaagtgaag
tcattgtcaatccacccacatcaaaacctcttatcctcagaacaactgagttgggctctt
gaaacctctttcgttgatattgtcaacttggtcagtgttgaagttaacaaagctacggat
aataattactatgctagcgcgctcaaatacatttctggctttggaaaacgtaaagctatc
gatttcttacaatcacttcaaaggctaaatgaaccattattggctcgtcagcagttaatt
actcataacattcttcacaagactatttttatgaattctgccgggttcctctacatctcg
tggaatgagaaacgacaaaaatacgaagatttggaacatgaccaattagacagcactaga
attcatccggaagactaccatttagctaccaaggttgctgctgatgctttggaatacgac
cctgatactattgccgaaaaagaagaacagggaaccatgagtgaattcattgaactgcta
agggaggatcccgatcgtagagcgaaactagaatcgttgaatttagaatcatacgcggaa
gaacttgaaaagaatactggattaagaaaacttaataatttaaatacaatcgtccttgaa
ttgttggatggatttgaagaattgagaaatgacttccaccctctgcaaggtgatgaaatt
ttccaaagtttaactggtgagtctgaaaagaccttttttaagggcagtatcattccggtt
agggtagaaagattttggcacaacgatatagtttgcactacaaactctgaagttgaatgt
gtagtgaatgctcaacgtcacgcaggtgcacaattaaggagacctgcaaatgaaatatac
gaaattggaaaaacgtatccagcaaaggtaatatacatcgactatgctaatattactgcg
gaagtctcgttattagaccatgatgtcaaacagcaatatgtcccgataagttacagtaaa
gacccttccatttgggacttgaaacaggaactagaagatgccgaagaggagaggaaactg
atgatggcagaggcccgtgcgaagagaacacatcgtgttatcaatcatccttactatttt
cccttcaacggcagacaagctgaagattacttgaggagtaaggaacgtggtgaatttgtg
atcagacagtctagccgaggtgatgaccatttggttatcacttggaagttggataaggat
ttatttcaacatattgatattcaagaattagaaaaagaaaatcctttggcattaggtaaa
gttctggttgtcgacaaccagaaatacaatgatttagaccagatcattgtagaataccta
caaaacaaagtaagacttttgaacgaaatgacatctagtgaaaaattcaaaagtggtact
aagaaggatgtggtcaagttcattgaagactactctagagtgaatccaaataaatctgtc
tactattttagtctgaactacgataaccctggttggttttatttaatgttcaagattaac
gcaaatagcaaattatacacatggaatgtgaaattaacgaacactggttatttcctggta
aactacaattatccaagtgttattcaactttgtaatggttttaagactcttttaaaatct
aacagtagtaagagtaggatgaacaactatcgttag
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integrated database retrieval system