Saccharomyces paradoxus: SPAR_G03370
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Entry
SPAR_G03370 CDS
T08193
Name
(RefSeq) Nup57
KO
K14308
nuclear pore complex protein Nup54
Organism
spao
Saccharomyces paradoxus
Pathway
spao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SPAR_G03370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_G03370
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SPAR_G03370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
54630731
NCBI-ProteinID:
XP_033766459
UniProt:
A0A8B8URU2
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Position
VII:complement(708490..710118)
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AA seq
542 aa
AA seq
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MFGFGGSNNGFGNKPAGSTGFSFGQNNNTNTQPSGSGFSFGGSQPNSGATATSGFGANQT
TNTFGSNQQNSTGGGLFGNKPALGSLGSSSTNASGTTATGTGLFGQQTAQPQQSTTGGGL
FGSKPTTTTGGLFGSTAQNNSTTGGGLFGNKIGSTGSLMGSTSTQNTSNMNGGGLFGAKP
QNTTPATGGLFGSKPQGPTASGGMFGSGTQNNNTLGGGGLFGQSQQPQTSTMPGFGNTVS
TQPSFAWSKPSTGSNLQQQQQQQQFQVPLQQTQAIAQQQQQLSNYPQQIQEQVLKCKESW
DPNTTKTKLRAFVYNKVNETEAILYTKPGQVLQEEWDQAMEKKPSPQTIPIQIYGFEGLN
QRNQVQTENVAQARIILNHILEKSTQLQQKHELDTASRILKAQSRNVEIEKRILKLGTQL
AILKNRGLPLGIAEEKMWSQFQTLLQRSEDPAGLGKTNELWARLAILKERAKNISSQLDS
KLMVFNDDAKNQDSMSQGTGEESNDRINKIVEILTNQQRGITYLNEVLEKDAVIVKEYKN
KT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtttcggcggtagtaataacggattcggaaacaaaccggctggttcgaccggt
ttttcatttggacagaataataatacaaatactcaaccttcaggttcaggatttagcttt
ggaggtagccagccaaattctggtgcgactgcgaccagtgggtttggtgccaatcagacc
acgaatacttttggaagtaaccaacaaaatagtacaggaggaggtcttttcggtaataag
ccagccctcggtagcttggggagttcaagcaccaacgcttcaggaactacagctactgga
acaggtttatttggccagcaaacagctcaacctcagcaatccaccactggaggaggacta
tttggaagcaagccaactaccacaaccggaggtctcttcggcagcactgcacaaaataat
agtactacaggcggggggttatttggtaataaaatcgggtccactggctcactgatgggc
agcactagtacgcaaaacacatctaacatgaatggtggtggactttttggcgccaaacct
caaaatactacaccggctacgggaggcttatttggtagtaagccgcagggaccaacagct
agtggtgggatgtttggaagcggcacccagaataacaatacccttggcggaggtggcctt
ttcggccaatcccagcagcctcaaacaagcactatgcctggattcggaaatacagtgtcc
acgcaaccatcatttgcctggtctaagccttcaactggatctaatttacagcaacagcaa
cagcaacagcaatttcaggtaccgttacaacaaacgcaagcaattgctcaacagcagcag
cagctttctaattatccccagcagattcaagaacaggtgttgaaatgtaaagaatcgtgg
gatccaaacacaacgaaaacaaaactgagagcatttgtatacaataaagtgaatgaaaca
gaagctattctatataccaaaccaggacaagtacttcaagaagagtgggatcaagcaatg
gaaaagaaaccttcccctcagacaatccctattcaaatatatggatttgaaggcttaaat
caacgcaatcaagtacaaactgaaaatgtcgcacaagctagaattatcttgaatcatatt
ttggagaagtccacacagttgcaacaaaagcatgaattggacaccgcatccagaattttg
aaggcacaatcaaggaatgtagaaattgaaaagagaatcttaaaactgggcacacagttg
gcaatcctgaaaaataggggactgccattgggtattgcagaagagaaaatgtggtcacaa
ttccaaactctacttcagcggagtgaagatcctgcaggtttgggtaagaccaacgaactg
tgggcacgtttggctatcctaaaagaacgtgctaaaaatatttctagccaactagatagt
aaactaatggttttcaatgacgatgccaaaaaccaagacagcatgtcccaaggcaccggt
gaagaatctaatgatcgtattaataagatagtggagattctgacgaaccaacagcggggt
ataacatacttgaatgaggttttagagaaggatgctgtaattgttaaagaatataaaaat
aagacgtaa
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