Saccharomyces paradoxus: SPAR_G03730
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Entry
SPAR_G03730 CDS
T08193
Name
(RefSeq) Mtr3
KO
K12587
exosome complex component MTR3
Organism
spao
Saccharomyces paradoxus
Pathway
spao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAR_G03730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_G03730
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SPAR_G03730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
54630767
NCBI-ProteinID:
XP_033766495
UniProt:
A0A8B8URT0
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Position
VII:complement(<785402..>786172)
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AA seq
256 aa
AA seq
DB search
MNVQDRRRLLGPAAARPMAFSNTTTPVLEKKSTNAPPEDSESEQELSLHTGFIENCNGSA
LVEARSLRHQTSLITAVYGPRSIRGSFTSQGTISIQLKNGLLEKYNTNELKEVGSFLMGI
FNSVINLSRYPKSGIDIFVYLTYDKHLPNNLLDDESQSKELIPQIASLIPHCITSITLAL
ADAGIEIVDMVGAGEANGTVVSFIKNGEEIVGFWKDDGDHEDLLDCLDRCKEQYNCYRDL
MISCLMKQKNLGTRSS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcaagatagaaggaggttactaggtcccgctgctgccaggccaatggcgttt
agcaacactactactcctgtgctagagaagaagtcgacaaatgcaccacctgaagacagc
gaaagtgaacaggaactttctctacacaccggtttcattgaaaactgtaacggatctgca
ttagtagaagctaggagcttaagacatcaaacatcgctgattaccgccgtttatgggcca
cgctccattagaggttccttcacatctcaaggtactatatctattcaattgaagaacggt
cttttggaaaaatataacacaaatgaattgaaggaagttggcagttttttaatgggcatt
ttcaattcagtaatcaacttatctcgctatccgaagtccggcatcgatatttttgtttat
ttaacttatgataagcatcttccaaataatctcctggacgacgaatcgcaaagcaaagag
ttgattcctcaaatagcatctctcatacctcattgcatcactagtataacgctagcctta
gctgatgccggcatcgaaatagtggacatggtaggtgccggagaggccaatggcactgtt
gtatcatttatcaaaaatggagaagaaattgttggtttttggaaggatgacggtgaccat
gaggaccttctagattgccttgatcgttgcaaggagcaatataactgttatagagattta
atgataagctgtttaatgaaacagaaaaacttaggcacgagatcatcctag
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