Saccharomyces paradoxus: SPAR_G03990
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Entry
SPAR_G03990 CDS
T08193
Name
(RefSeq) Tfg1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
spao
Saccharomyces paradoxus
Pathway
spao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPAR_G03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spao03021
]
SPAR_G03990
Transcription machinery [BR:
spao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
SPAR_G03990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
54630793
NCBI-ProteinID:
XP_033766521
UniProt:
A0A8B8US61
LinkDB
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Position
VII:838637..840856
Genome browser
AA seq
739 aa
AA seq
DB search
MSRRNPPGGRNGGGPTNASPFIKRDRMRRNFLRMRMGQNGSNSSSPGLPNGDGSRGSPVK
KDDPEYAEEREKMLLQIGVEADAGRSNVKVKDEDPNEYNEFPLRAIPKEDLENMRTHLLK
FQSKKKINPVTDFHLPVRLHRKDTRNLQFQLTRAEIVQRQKEISEYKKKAEQERSTPNSG
GINKSGTASLNNTAKDGSQTPTIDSATKDNTANGVNSSAATAAGSSVLPTSPISVSTVES
NGVANGSSSAANGLDDNAPAPNPVNGKLLVTKLEDAGPAEDPTKVGMVKYDGKEVANEPE
FEEGTMDPLADVAPDGGGRAKRGNLRRKTRQLKVLDENAKKLRFEEFYPWVMEDFDGYNT
WVGSYEAGNSDSYVLLSVEDDGSFTMIPADKVYKFTARNKYATLTIDEAEKRMDKKSGEV
PRWLMKHLDNIGTTTTRYDRTRRKLKAVADQQAMDEDDRDDNSEVELDYDEEFADDEEAP
IIDGNEQENKESEQRIKKEMLQANAMGLRDEEAPSENEEDELFGEKKIDEDGERIKKALQ
KTELAALYSSDEDEINPYLSESDIENKENESPVKKEEESDSLSKSKRSSPKKQQKKATNA
HVHKEPTLRVKSIKNCVIILKGDKKVLKSFPGGEWNPQTAKAIDINNNASNTASSPIKQE
EGLDSIAAEREETPAPTITEKDIMEAIGDGKVNIKEFGKFIRRKYPGAENKKLMFAIVKK
LCRKVGNDHMELKKEQVSL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacgcaatccaccaggcggtagaaacggggggggtccgactaatgcctctccc
tttattaaaagagacagaatgagaagaaattttctgaggatgagaatgggccaaaacggt
agcaattcgagttccccaggcctaccaaatggagacggcagtaggggatctcctgtaaaa
aaagacgatcctgagtatgctgaggagagagagaaaatgcttctacaaatcggtgttgaa
gcggatgctggtaggagcaatgtgaaagtaaaagacgaggatcccaatgaatataatgaa
tttcccttaagagctattccaaaagaggatttagaaaacatgaggacacaccttttgaag
tttcaaagtaagaagaagatcaaccctgtaacagacttccatctccccgtaagactgcac
agaaaggatacaagaaacttgcaatttcagctaacaagagcagaaattgttcaaaggcaa
aaagagatttctgaatataaaaaaaaggcggagcaagaaagaagtacacccaactcaggc
ggtattaataaatcagggacggcttcgctcaataatactgctaaagatggttcccaaaca
cctactattgactctgccaccaaagacaacacggcgaatggtgtaaactcctccgctgct
actgcagctgggtcttctgtccttcctactagccctattagtgtgtccaccgttgaaagt
aatggagtggcaaatggttcaagtagtgcagctaatggtttggatgataatgcacctgca
cctaatccagtcaatggcaagctgttagtgacaaaactggaagacgcgggtcccgctgag
gaccctactaaagtaggaatggtcaagtacgacgggaaagaagtggctaacgaaccggaa
ttcgaagaaggcaccatggatccattagcagatgtggcaccagatggaggcggtagagcc
aaacgaggaaatttgagaaggaaaacccgtcaactgaaagtccttgatgagaacgccaaa
aagctgagatttgaggaattttatccatgggtcatggaagatttcgatgggtacaacaca
tgggtgggctcttacgaagcaggtaactcagattcttacgttttgttaagtgtagaggat
gatggaagttttaccatgatccctgctgataaggtttataagttcactgcaagaaataag
tatgctactttgaccatcgacgaggcggaaaagaggatggacaagaaaagtggtgaagtg
ccacgttggttgatgaagcatttggataatataggtacaactacaactagatatgacaga
acaaggagaaagcttaaagctgttgctgaccaacaagctatggatgaagatgatcgtgat
gataattctgaagtagagttagattatgatgaagagtttgccgatgatgaagaggcacca
attatagatggtaatgaacaagaaaataaagaatcagaacaaagaatcaagaaggagatg
ctgcaagctaatgcgatgggtcttcgtgatgaagaagctccatccgaaaacgaagaggat
gaattatttggtgaaaagaagattgatgaggacggtgaaagaattaagaaggcattacaa
aagaccgaactagcagcattatactcctcagatgaagatgagattaacccatacttatct
gaatctgatatagaaaacaaagaaaacgaatcgcccgttaaaaaggaagaagagtcggac
agtctatccaaatccaagagatcctccccaaagaaacaacaaaagaaagctacaaatgca
catgtgcataaagagccaactttgagggtgaaaagtattaaaaattgtgtcattatcttg
aagggagataagaaagtactaaaaagcttcccagggggagaatggaatccacagacagca
aaagctatagatatcaataataatgcatcaaatacagcgtcttcgccaatcaaacaggag
gaaggtctagattctatagcagccgaaagagaagaaactccagcgcctaccataacagaa
aaagatattatggaagccattggtgatggtaaagtcaatatcaaagaatttggaaagttc
attagaagaaaataccctggcgcggaaaacaagaagctaatgtttgccatagttaaaaaa
ttatgtcgaaaggtgggcaatgaccacatggaattaaagaaagagcaggttagtttataa
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