Saccharomyces paradoxus: SPAR_I00260
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Entry
SPAR_I00260 CDS
T08193
Name
(RefSeq) Ssl2
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03022
Basal transcription factors
spao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPAR_I00260
09124 Replication and repair
03420 Nucleotide excision repair
SPAR_I00260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spao03021
]
SPAR_I00260
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_I00260
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPAR_I00260
Transcription machinery [BR:
spao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SPAR_I00260
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SPAR_I00260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
SBP_bac_6
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
54631230
NCBI-ProteinID:
XP_033766911
UniProt:
A0A8B8UT79
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All DBs
Position
IX:complement(74450..76981)
Genome browser
AA seq
843 aa
AA seq
DB search
MTDVEGYQTKSKGKIFPDMGESFFSSDEDSPATDAEIDENYDDNKETLDGGEERDTGVMV
TGLKKARKKTKSSRHTAADSSMNQMDAKDKALLQDTNSDIPADFVPDSVSGMFRSHDFSY
LRLRPDHASRPLWISPSDGRIILESFSPLAEQAQDFLVTIAEPISRPSHIHEYKITAYSL
YAAVSVGLETDDIISVLDRLSKVPVAESIINFIKGATISYGKVKLVIKHNRYFVETTQAE
ILQMLLNDSVIGPLRIDSDHQVQPAEDTLQQNLQQTAGKPATNVNPSDVEAVFSAVIGGD
NEREDDDDDIDAVHSFEIANESVEVVKKRCQEIDYPVLEEYDFRNDHRNPDLDIDLKPST
QIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLCTSSVSVMQW
RQQFLQWCTLQPENCAVFTSDNKEMFQTESGLVVSTYSMVANTRNRSHDSQKVMDFLTGR
EWGFIILDEVHVVPAAMFRRVVSTIAAHAKLGLTATLVREDDKIGDLNFLIGPKLYEANW
MELSQKGHIANVQCAEVWCPMTAEFYQEYLRETARKRMLLYIMNPTKFQACQFLIQYHER
RGDKIIVFSDNVYALQEYALKMGKPFIYGSTPQQERMNILQNFQYNDQINTIFLSKVGDT
SIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYST
KRQAFLVDQGYAFKVITHLHGMENIPNLAYASPRERRELLQEVLLKNEEAAGIEVGDDAD
NSIGRGSNGHKRFKSKAVRGEGSLAGLAGGEDMAYMEYTTNKNKELKEHHPLIRKMYYKN
LKK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgttgaaggctaccaaaccaagagcaaggggaaaattttcccagatatgggt
gagtcctttttctcatcagatgaggactcaccggctactgatgcagagatcgatgagaac
tatgatgataataaggaaacgctggacggcggtgaggaaagggacaccggagtcatggtt
acaggactgaagaaggcacggaagaagaccaaaagtagcaggcatacagcggcggattct
tctatgaatcaaatggacgctaaggataaggcgcttttacaggacactaatagcgatata
ccggcagatttcgttccagattccgtctcaggaatgttcagaagtcatgactttagttac
ttgcggttgaggccagatcatgcttcaaggcccctttggatctcgccaagtgatggtaga
atcattctggaaagtttttctccactggcagaacaggctcaagactttttggtcaccatt
gcagagcctataagtagaccttctcatattcacgaatacaagatcactgcatactctttg
tatgctgccgtttctgtagggttagaaacggacgatatcatttcggtcttggatagactg
tctaaagtaccagttgcggaatcgataatcaacttcatcaagggggctaccatttcctac
ggtaaagtgaaattggttatcaagcataatagatatttcgtggagactacgcaagcagaa
attctacaaatgttgctgaatgattccgttatcggacccctaaggatagatagcgatcat
caggtacagccagcagaggacacattgcagcagaatcttcaacagaccgctggaaaacca
gccactaatgttaacccgagcgacgtggaggccgtgtttagtgcagttataggtggcgat
aatgagcgggaagatgatgatgatgatattgatgcggttcactcttttgaaattgccaac
gagtctgttgaagtcgtaaagaaaagatgccaagaaatagattatcccgtgttggaagaa
tatgacttcagaaatgatcatagaaatccagatttagacattgatttgaaaccttccact
cagatcagaccttatcaagaaaaatcgctgagtaaaatgtttggtaatggccgtgctcgt
tcagggattattgttttgccatgtggtgcaggtaaaaccttggtcggtattactgcagca
tgtactataaaaaaatccgtgattgttttatgtacttcatcagtctccgtcatgcaatgg
aggcagcaatttttgcaatggtgtaccttacaaccggaaaattgtgctgttttcacctct
gataataaggaaatgtttcaaacggagtccggtttggttgtttccacttattcgatggtg
gcaaacacaagaaataggtctcacgattcacaaaaggttatggattttttgactggtaga
gaatggggatttattattcttgatgaagttcatgtggtacccgccgcaatgttccgtagg
gtggtctccaccatcgcagcacatgccaaattgggactgactgcaacactggttagagaa
gatgataaaattggtgatctgaattttttaattggtccaaaactttacgaagcgaattgg
atggaattgtcccaaaagggacatattgcaaacgtccaatgtgcggaagtttggtgtccc
atgacagcagaattttaccaagagtatttaagagaaaccgcaaggaaaagaatgttgttg
tatatcatgaatccaacaaagtttcaggcgtgccaatttttaattcaatatcacgaaaga
agaggtgataagatcatcgttttctctgataatgtttatgccttacaagaatatgccttg
aaaatgggaaaaccgtttatttatggttccacgccacaacaagagcgtatgaatattttg
caaaatttccaatacaatgaccaaatcaataccatttttctatcaaaagttggtgatact
tccattgatttaccggaagccacttgtttgattcaaatatcttctcactatgggtctcgt
cgtcaggaagcccaaagattaggaagaattttaagagctaaaagacgtaatgacgaaggt
ttcaatgcgttcttttattctctggtttctaaggatacgcaagaaatgtattactcaaca
aagagacaagcgttcttggtcgatcaaggttacgcattcaaagttattacacatttacac
ggaatggagaacatcccaaacttggcatatgcttcacccagagaacgtagggagctactg
caagaagtactgttgaagaacgaagaagctgctggcattgaggtcggtgatgacgctgac
aattctatcgggagaggttcgaacggacacaaaagatttaaatcaaaggccgttagaggc
gaaggttcattggctggtctcgctggcggcgaagatatggcatatatggagtataccacc
aacaagaacaaagaactgaaggaacatcatccattaattagaaagatgtattacaagaat
ttgaagaagtga
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