Saccharomyces paradoxus: SPAR_J00980
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Entry
SPAR_J00980 CDS
T08193
Name
(RefSeq) Utp10
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
spao
Saccharomyces paradoxus
Pathway
spao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAR_J00980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_J00980
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAR_J00980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
54631507
NCBI-ProteinID:
XP_033767178
UniProt:
A0A8B8UTW9
LinkDB
All DBs
Position
X:complement(208994..214303)
Genome browser
AA seq
1769 aa
AA seq
DB search
MSSLSDQLAQVASNNATVALDRKRRQKLHSASLIYNSKTAATQDYDFIFENASQALEELS
QIEPRFAIFSRTLFSESSISLDRNVQTKEELRDLDNAINAYLLLASSKWYLAPTLHATEW
LVRRFQIHVKNTEMLLLSTLNYYQTPVFKRILSIIKLPPLFNCLSNFVRSENPPTGLTMV
KLFNDMDFLKLYTNYLDQCIKHNATYTNQLLFTTCCFINVVAFNSNNDEKLNQLVPILLE
ISAKLLASKSKDCQIAAHTILIVFATALPLKKTIILAAMETILSNLDAKEAKHSALLTIC
KLFQTLRGQGNVDQLPSKIFKLFDSKYDTASVLSFLDKEDKPVCDKFITSYTRSIARYDQ
SKLSIILSLLKKIRLERYEVRLIIIDLIHLSEILDDKSQLVELFEYFTSINEDLVLKCLR
SLGLTGELFEIRLTTSLFTNADVNTDIVKQLSDPVEVSKKDTASFQAFLDKHSEFINTTN
MSMLAETGERYKKVLSLFTEAIGKGYQASSFLTSFFTTLESRITFLLRVTISPAAPTALK
LISLNNIAKYINSIEKEANIFTLVPCLICALRDASIKVRTGVKKILSLIAKRPSTKHYFL
SDKLYGENIAIPMLNPKDSEAWLSGFLNEYVTENYDISRIFTPKRNEKVFLLFWANQALL
IPSPYAKTVLLDNLNKSSTFASSYSSLFEEFISHYLENRSSWETSCIANKANFEHFERSL
VNLVSPKEKQSFMVDFILNALNSDYEQLANIAAERLISIFASLTNAQKLKVVQNMVDSSS
SVESSYDTVGVLQSLPLDSEIFVSILNQNSISNEMDQTDFSKRRRRRSSTSKTAFLKEEV
SQLAELHLRKLTIILEALDKVKIVGSEKLLSTLLSLLSDLETLDQDGGLPVLYAQETLIS
CMLNTITYLKEHGCTELTNVRADILVSAIRNSASPQVQNKLLLVIGSLATLSSEVILHSV
MPIFTFMGAHSIRQDDEFTTKVVERTILTVVPALIKNSKGNEKEEMEFLLLSFTTALQHV
PRHRRVKLFSTLIKTLGPVKALGSFLFLIAQQYSSALVNFKIGEARTLIEFIKALLVDLQ
VREELSGLNDLLDIIKLLTSSKRSSEKKKSLESRVLFSNGILNFSESEFLAFVNNTFELI
NKITEETDQDYYDVRKNLRLKVYSILLDETSDRKLIEKIRDEFGTFLESILFFINSVELT
FSCITSQENEEVSDSETSFSDHTTEIKEILLKVLGNVLQILPVDEFVNAVLPLLNTSTNE
DIRYHLTLVIGSKFELEGSDAIPIVDDVLKVLLERMPLESKSVVISQVILNTITALVSKY
GKKLDGFILTQALTLATEKISSDMTEVKISSLALITNCVQVLGVKSIAFYPRIVPPSIKL
FNASLEDSSNPLKEQLQVAILLLFAGLIKSIPSFLMSNILDVLHVIYFAREVDTSIRLSV
ISLIIEHIDLKEVLKVLFKIWSAEIATSNDTVAVSLFLSTLESTVEGIDKKSATSQSPIF
FKLLLSLFEFRSISSFDNNTISRIEASVHEIANSYVLKMNDKVFRPLFVILVRWAFDGEG
VTNTSITETERLLAFFKFFNKLQENLRGIITSYFTYLLEPVDILLKRFISKDIQNVNLRR
LVINSLTSSLKFDRDEYWKSTSRFELISGSIVNQLSNIENSIGKYLVKAIGALASNNSGV
DEHNQILNKLIVEHMKASCSSTEKLWAVRAMKLIYSKIGESWLVLLPQLVPVIAELLEDD
DEEIEREVRTGLVKVVENVLGEPFDRYLD
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgttgagtgaccaattagctcaagttgcttccaacaatgctactgttgcgttg
gatagaaagagaagacaaaaacttcattctgcttctttaatttataactcaaagacggct
gcaacacaagattacgatttcatttttgaaaatgcaagccaggctcttgaagaattgagt
caaatcgagccaaggtttgccattttctcaagaactctcttttcagagtcttccatttct
cttgatagaaatgtccaaacaaaagaagaacttagagatttggataatgccatcaatgcg
tatttgctattggcttcttccaagtggtatttagcgcctacattacatgcaacggaatgg
ttagttcgtcgttttcaaatccatgttaaaaacacagaaatgctgcttttgtccactcta
aattactatcaaactcctgtctttaagagaattctcagcattatcaaactgccccccttg
tttaattgtttgtccaatttcgttagaagtgaaaatcccccaacaggcctgaccatggta
aagctcttcaatgacatggatttcctgaaactttacactaattatctggatcaatgtatt
aagcataatgcaacgtatactaaccagcttttatttacaacatgctgctttatcaacgtc
gttgctttcaattccaacaacgatgaaaaactaaaccagcttgttccaatcttacttgaa
atttcagctaaacttttagcctctaaatcaaaagattgtcaaatagctgcacatacgata
ttgattgtattcgctactgccttacctttaaagaaaacaattattttagctgccatggaa
accattctttcaaacttagatgctaaagaagcgaaacattcagcacttctcacaatttgt
aagcttttccaaacattaagagggcaaggtaacgtagatcaactaccctccaaaattttc
aagttattcgatagcaagtatgacactgcatctgtcctgtctttcttagataaggaagat
aaaccagtctgtgataaattcattacctcctatactagatccattgcaaggtatgaccaa
tccaaattgagcattattctcagcttattgaaaaaaataagactagaaagatacgaagtt
agattgatcatcattgatttaattcatctttctgaaattttagacgataagtcacaattg
gtggaattattcgaatatttcacctctatcaatgaagatctggtgctaaaatgtttgaga
tcattaggattaactggcgaactcttcgaaataaggctgactacatctttattcaccaat
gccgatgttaacaccgacattgtaaagcaattaagcgaccctgtggaggtctctaaaaag
gatacggcttcattccaagcattcttagataaacattcagaatttatcaacacaacaaat
atgtccatgctagcagaaactggagaaagatataaaaaggttttatccctatttactgaa
gctattggtaaaggttatcaagcaagttcttttttgacttcctttttcactactttagaa
tcaagaataacgttcttgttaagagttactatatctccagccgctccaaccgcactaaag
ctaatatcattaaacaatattgcaaaatatattaacagtattgaaaaggaagctaatatt
tttactttagttccatgcctgatttgtgctctgcgagatgcctccataaaagtcaggact
ggcgtaaagaagattctttccttgatagctaaaagaccatccacaaagcactatttttta
tctgataaactttacggagaaaatattgccattcctatgttaaatcccaaagatagtgaa
gcctggttatcagggtttttgaacgagtacgtcactgagaattatgacatatccagaata
tttacgccaaagagaaatgaaaaggtctttttgttgttttgggccaatcaagccttgctg
ataccttctccgtatgctaagacagtgttgttggataatctgaacaaaagttcgactttt
gcatcttcctactcttctttgttcgaagaatttatttcccactacttggaaaacagatct
agttgggaaacaagttgtattgctaataaagcaaattttgaacattttgagcggtcttta
gttaatttggtatcaccaaaggagaagcagtcatttatggtcgattttattctcaacgct
ctaaactcggattatgagcaattagctaatatcgctgccgagaggcttatcagcatattt
gcttcattgactaatgctcaaaaactaaaagttgtccaaaatatggtggattcttcgagc
agcgtggaatcatcgtacgacacagtcggtgtgctacaatcgttgccgctagattctgag
atttttgtatccatactgaatcaaaacagtatcagtaacgaaatggatcagacagacttt
tccaaaagaaggagaagacgctcatcgacgagtaaaaccgcatttttgaaagaggaggtt
tcccaactagcagaattgcacttgagaaaattgacgattattttggaagcacttgataag
gtcaaaattgttgggtccgaaaagcttttgtccactctactttccttattatcagatttg
gaaactttggatcaagacggtggattgccggttttgtatgcgcaggaaactttgatttct
tgtatgctgaacacaattacgtacttgaaggaacatggctgtacagaactaaccaacgta
agggcagatatattggtatccgccatcagaaattcagcttctccgcaagtccaaaacaaa
ctattacttgtgattggttctctcgctactttaagttcggaagttattttgcattctgtg
atgcctatctttactttcatgggggcccatagtattcgtcaagatgacgaatttaccact
aaagttgttgagcgtaccatactaactgttgttcctgccttgattaagaatagtaaagga
aatgaaaaagaagaaatggagtttctcttgttgagtttcacaaccgctttgcaacacgtc
ccaaggcatagaagggtcaaactattttctacattgatcaaaacacttggtccggtcaag
gcgttgggttctttccttttcttaatcgcacaacagtattcttcagctttagtcaacttt
aaaattggcgaggcaagaacattaattgaatttatcaaggccttactcgttgacctacag
gtcagggaggagttatcaggtttgaatgacttactcgatattatcaaattgctgacatca
tcaaagagatcctcagaaaagaaaaaatcactagaatctcgtgttttgttttcaaatggt
atcttaaatttttcagaaagtgaatttttggccttcgtcaacaacacttttgaacttatc
aataaaataactgaggagaccgaccaagattattacgatgtgaggaaaaatttacgatta
aaggtatattccattcttttggatgaaacaagcgatcggaagttaattgaaaagatcaga
gacgaatttggaacctttttagagagtattctttttttcatcaactccgtagaattaacc
ttttcatgcataacttcccaagaaaacgaggaagtctctgactctgaaacatcattttca
gatcacaccactgaaataaaggagatcctattgaaggtgcttggcaatgtgttacaaatt
ttaccagtggacgagtttgttaacgcggtattacctttactaaatacctccactaatgaa
gacattagataccacctgacgttggtaattgggtccaaatttgagttggaaggctctgat
gctatccccatagtggacgatgtattgaaggttttgcttgaaagaatgcctttggaatct
aagtctgttgttatttctcaagtaatattaaacacaataacggctttggtaagcaaatat
ggtaagaagcttgatgggtttatattaactcaagctcttacccttgctactgaaaaaatc
agctctgacatgacagaagtcaagatatcctcgttggctttgataactaactgtgttcaa
gtattaggcgtcaaatcaattgcattctacccaaggatagtccctccttctattaaacta
tttaatgcttcattagaggatagcagcaacccattaaaggagcaattgcaggttgctata
ctgctgttgttcgcaggtctaatcaaaagcattccaagtttcttgatgtcaaatattctg
gatgttttgcatgttatttattttgcccgtgaggttgacaccagcattaggctatcagtg
atttcactgatcattgaacatattgatttgaaggaagttttgaaagttttattcaaaatt
tggtccgctgaaatagcaacatccaatgatacggttgccgttagcctatttttgagtaca
ttagaatccactgttgaaggtattgataaaaaatctgcgacttcacaatcgcctatattt
ttcaagttattactatctctattcgaattcagatctatttcgagtttcgataataataca
attagtaggatagaagcttccgttcacgaaattgccaactcttatgtcctgaagatgaat
gacaaagtatttagaccgctgtttgttatattagtaagatgggcatttgacggtgaaggc
gttacaaatacaagtattactgaaacagaaagactgttagctttcttcaagtttttcaat
aagcttcaagaaaatttgagaggtataattacttcctatttcacgtatttgttagaacct
gttgatatattactgaagaggttcattagcaaggacatacaaaatgttaacttaagacgt
ctagtaatcaactctttgacatcttcactaaagtttgatagagacgaatattggaagtca
acctccagattcgaattaatttctggatccatagtcaatcaattatccaatatagaaaac
tctattgggaagtatttagtcaaggcaattggcgctctggcttctaataatagtggcgtt
gatgagcataaccaaattctgaataagctgattgttgaacacatgaaagcttcctgttcc
tccactgaaaaactatgggctgttagagccatgaaattgatatactctaagataggtgaa
agttggttagttctcttgccacaacttgttcccgtcattgccgagttattggaagacgat
gatgaagagattgaacgcgaagtcaggaccggtttagtcaaggtcgtcgagaacgtttta
ggggagccttttgataggtatttagattaa
DBGET
integrated database retrieval system