Saccharomyces paradoxus: SPAR_J01140
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Entry
SPAR_J01140 CDS
T08193
Name
(RefSeq) Srs2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03420
Nucleotide excision repair
spao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPAR_J01140
03430 Mismatch repair
SPAR_J01140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_J01140
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPAR_J01140
DNA repair and recombination proteins [BR:
spao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPAR_J01140
MMR (mismatch excision repair)
Other MMR factors
SPAR_J01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
54631523
NCBI-ProteinID:
XP_033767194
UniProt:
A0A8B8UTW3
LinkDB
All DBs
Position
X:254423..257953
Genome browser
AA seq
1176 aa
AA seq
DB search
MSSNNDLLLHLVSQLNTQQRAAALFDYTRGLQVIAGPGTGKTKVLTSRVAYLILHHHIHP
RDIIVTTFTNKAANEMKERLQGMLRGAGVNISELLIGTFHSICLRILYRFGHLVDLQKEW
RIIDEKEIDTILDDMIEKVPDQIRDYASSITRKVNLCMPKKNGDEWTIHPKLIKKQISKL
KSNAILPEEYILDSNHDAALAYFYQIYQSELSKKNTLDFDDLLMYTFRLLTRERVLSNVK
HVLVDEFQDTNGIQLDLMFLFAKGNHHLSRGMTIVGDPDQSIYAFRNALAHNFLEMGRKC
PIEYSTIILVENYRSSQKILNTSEILITQQNKGRQNRTPLRAQFDLDFPPVYMNFPAYFL
EAPSLVRELLYLKALPNLFTFNDFAILVRQRRQIKSIESALIEHRIPYKIIRGHTFWDSK
ETRAMLNLLKLIFSPNDKHAILASLLYPARGLGPATGEKIKNALDTLATDASCFQILKDI
SSKKTMLDIPTKGRSVIADFISMIENCQLLLQSTLLGGLSDLFDKLYELSGLKYEYLYKD
GKKKTDQLEQSEPNLLNARHKNIELLKNYFLALLNKSESPDREKNEGMKAAADEADPVES
KVISPREYLRNFFNSLSLHSDAVEEEESESNKNAKMNREKNGFVTISTIHGAKGLEWPVV
FIPGCEEGIIPCVFNDDKKDESEEDEDEDSEKAKKDASPKKTRILSVEDSIDEERRMFFV
AQTRAKYLLYLSNTTTVEDVDRPRIASRFLTTDLVKGMSDSQKLFESTNSIKKLYRILNK
KPPAQNDKLFSLDQLRNDYNQFIENRRERMIWQGIQMNDIYGIQLSKNKLSGSVSDFTSA
ADQLRLETNSSIFPQKKFTERPHPSKTTGSYAPKSRVKSPEKRYAPETTSHHSPTKKKVF
APQYISTNNVPSRREFHSATGKNIPFLRREDRSITDISPRSSTRSLRGASPNKTSHMPDD
LIGPSPTRPSRDKVVSNIHFPTAGTFRIETQSNVDELYPSGFPNKSGHSLTSSEFSGFSS
VCSNSDQSNNLIRDIKNELDLSDEELLNDISIERRRELLGSKKKEKTKPKSRNRKSKRSD
KVKNEEVIDLKSEFEEDDSRNTTAAELLHNPDDTTVDNRPIISNAKFLADAAMKKTHKFS
KKVKNEPASSQMDIFSQLSRAKKKSKLNNGEIIVID
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaaataatgatcttttgttgcatttagtatcccagttaaatacacaacagaga
gccgcggccctctttgattacactagaggactgcaggttatagccggtcccggcacaggg
aagactaaagttttaacttcgagggtagcctatcttattctgcatcatcacatccatcct
cgagatattatagtgactactttcactaacaaagctgccaacgagatgaaagaacgtttg
caaggaatgttacgcggggcaggagtcaatatttcggagctcttaattggtactttccat
agtatttgcctgagaatactttacagatttggccacttggtggatctacagaaagaatgg
agaattatcgatgaaaaggagatagacaccattttagatgacatgattgaaaaagttccc
gatcaaataagggattatgcttcctcgatcacgaggaaagtgaatttatgtatgccaaaa
aagaatggagatgaatggaccattcatccgaaactgatcaagaaacagatttcaaaactg
aaatcaaacgcaatattacccgaggaatacattcttgactcgaaccatgacgctgcgctg
gcctatttttaccaaatttaccaatccgagctaagcaagaaaaataccctagactttgat
gacctactaatgtacactttccgtttgctgactagggagcgtgttttatccaacgtaaag
catgttttagttgacgaatttcaagatactaacggcattcaattagacttgatgtttctt
ttcgctaagggaaatcaccatctctccagagggatgaccatcgtaggcgatcctgatcaa
agcatatatgctttcaggaatgccttagctcacaactttctagaaatgggtaggaaatgc
cccatcgagtactcgactattatactcgtggagaattatcgttcctcacaaaaaattcta
aacacaagtgaaattttgataacacaacaaaacaaaggccgccagaataggactccactt
cgtgcccaatttgatttggatttcccaccagtttatatgaatttccccgcttacttttta
gaggcaccttctttagtccgagaactactatatttgaaagccttaccgaacttattcacc
tttaatgactttgccatcttagtaagacaacgcaggcaaattaaaagtattgaaagtgca
ctaatagaacatcgaataccctataagattataaggggacacactttctgggattccaag
gaaacaagggcaatgttaaacttgctgaaattgatattttctccgaatgataaacacgca
attcttgcttcacttttatacccggcaagaggccttggtcctgctactggtgagaaaatc
aagaacgcattggacacactagctacggatgcatcatgctttcaaatattaaaggacata
agtagtaaaaaaacaatgctggacataccgacgaaaggccgttctgtcatagcagacttc
atttcaatgatagaaaactgtcaattgttgctccaaagcactctattaggagggctttca
gatttatttgataaactttatgaactgtcgggtttgaagtacgaatacttgtacaaggat
ggcaagaaaaaaaccgaccagctggaacagtccgaacccaatttattgaatgcaagacac
aagaatattgagcttttaaaaaactattttctggctcttctcaataagtcagagtctcca
gatagagaaaaaaatgaaggtatgaaagcagcagccgatgaagctgacccagtagagagc
aaagtcattagtccaagagaatacctccgcaattttttcaattcactgtcccttcattcc
gatgcagttgaggaggaagagtcggaatccaacaaaaatgcaaaaatgaatcgcgaaaaa
aatggctttgtcacaatatctacaatccacggtgctaaaggtcttgaatggccggtagtt
tttattcccggatgcgaagagggaataatcccttgtgtgttcaacgatgataaaaaggat
gaatcagaagaggacgaggacgaagattcagaaaaggctaaaaaagatgcgagtcccaaa
aagactagaattttatctgtggaggattctatagatgaagagagaaggatgttttttgtt
gcacaaactcgtgcaaaatacctgttgtatttatcaaacactacaacggtggaagatgtc
gatagaccacgaatagcgagccgatttctgaccaccgacttggtaaagggcatgtctgat
agccaaaaattatttgaaagtacgaatagtatcaaaaaactatatcgaattttgaacaag
aagcctcctgcccagaatgataaactattttcgcttgatcaattacgcaatgactataac
cagttcattgaaaataggagagaaaggatgatttggcaaggaatacaaatgaatgatatc
tatggaatacagttgtctaaaaataaactatcggggtctgttagcgattttacatcagct
gcagatcagttacgacttgaaacgaatagctctatattcccacaaaagaaatttactgaa
aggcctcacccatccaaaaccactggcagttacgctcctaaaagtagagttaaaagtcca
gaaaaaaggtacgctccagaaactacatcacaccattctccaacaaaaaaaaaggtgttt
gcgcctcaatacatttcaacaaataatgtacccagtagacgagagtttcattctgccact
gggaaaaacattccctttctaagaagagaagataggtccattacagacatatctccaaga
tcatcaacaagatcattaagaggagcatctccgaataaaacaagccacatgccagatgat
ttaataggaccatcaccaacaaggccttcgagagacaaagtcgttagtaatattcacttc
ccaactgcaggcacttttagaatagaaactcagtcaaatgtggatgaactgtatccctca
ggattccccaataaatcaggtcactcgcttacgtccagtgaattttctggattttctagc
gtgtgcagtaattctgatcagtcaaacaacttgatacgagatataaaaaacgaattagat
ttatccgatgaggagttattaaatgatatatcaatagaaagaaggagagagcttttgggc
tcaaaaaaaaaagagaaaacaaaaccaaaatctcggaataggaagtccaagaggagtgac
aaagttaagaatgaggaagtgatagatttgaagagtgaatttgaggaagatgatagcaga
aatacaactgctgccgagttgttacataatcctgatgacaccacggttgataatcgtcca
ataatctcaaacgccaagtttttggctgacgcagctatgaaaaagacacacaaattttct
aaaaaggtgaagaatgaacctgcatcaagtcaaatggatatattttctcagctgtcgcgt
gcgaaaaaaaaatcaaaactaaataacggtgaaattatagtcatcgattag
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integrated database retrieval system
