KEGG   Saccharomyces paradoxus: SPAR_K01970
Entry
SPAR_K01970       CDS       T08193                                 
Name
(RefSeq) Prp40
  KO
K12821  pre-mRNA-processing factor 40
Organism
spao  Saccharomyces paradoxus
Pathway
spao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAR_K01970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spao03041]
    SPAR_K01970
Spliceosome [BR:spao03041]
 Complex A
  U1 snRNP components
   U1 related factors
    SPAR_K01970
 Complex B
    SPAR_K01970
SSDB
Motif
Pfam: FF WW WW_TCERG1 Glyco_hyd_101C WW_2
Other DBs
NCBI-GeneID: 54631965
NCBI-ProteinID: XP_033767612
UniProt: A0A8B8UV14
LinkDB
Position
XI:440018..441769
AA seq 583 aa
MSVWKEAKDANGRVYYYNTLTKKSTWEKPKELISQEELILRENGWRAAKTAEGKVYYYNP
TTRETSWTLPAFEKKVEPIKEEQNDAIPSAQADGNKIGLTDERKKELSQSIREEGSQYAN
NSKLLNVRRRTKEEAEKEFITMLKDNQVDSTWSFSRIISELGTKDPRYWMVDDDPLWKKE
MFEKYLSNRSADQLLKEHNEISKFKEAFQKMLENNSYIKYYTRWSTAKRLIADEPIYKHS
VVNETTKRQTFQDYIDTLVDAQKESKKKLKTQALKELREYLSGILTTSSPETFITWQQLV
NHYVFDKSKRYMANRHFKVLTHEDVLNEYLKIVNTIENDLENKLNELRLRNYTRDRIARD
NFKSLLKEMPIKIKANTKWSDIYPYIRSDPRFLHMLGRNGSSCLDLFLDFVDEQRMYIFA
QRSIAQQTLIDQKFEWNNADGDEITKKNIEKVLANDQKFDKVDKEDISLITDGLIKQRNE
KIQQKFENERRILEQKKHYFWLLLQRTYTKAGKPRPSTWDLASKELGESLEYKALGDDDN
TRRQIFEDFKPESPAPTAESTTASLTLTASKKRHLSPAVELDY
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgtctgtttggaaggaggctaaagatgcaaatggaagggtatattattacaacactttg
acgaagaaatccacatgggagaagccaaaggaacttatatctcaggaagaactgattctt
cgagaaaacggttggagggcggccaagacggcagaaggcaaagtatactattataatccc
accacaagagaaactagctggactctcccggccttcgagaagaaagtagaacccatcaaa
gaagaacaaaatgatgcaataccatctgcacaagctgatggtaataaaataggacttaca
gatgagagaaaaaaagagctaagccaaagtattagagaagagggaagccaatatgccaat
aactctaaactgctcaatgtcaggagaaggactaaagaagaggcagaaaaggaatttatc
acgatgctgaaggacaaccaagtagactctacttggtcattcagtagaattatttcagaa
ctaggaaccaaagatccgaggtattggatggtcgacgatgatcccttatggaaaaaagaa
atgtttgaaaaatatctttccaatagatcggctgatcaacttctaaaagaacataatgaa
ataagtaaattcaaagaggcttttcaaaaaatgctagaaaacaattcttatataaaatat
tacacccgttggtctaccgcgaagagactaattgctgatgaaccaatatacaaacactct
gtggtcaatgaaacaacaaagaggcagaccttccaagattatatagacactctcgtcgat
gcccagaaagagtccaaaaaaaaattgaagacgcaggccctaaaagaattaagagaatat
ttaagcggtattctaacaacttcatctcccgaaactttcataacatggcagcagcttgtc
aatcactatgtttttgataagagtaagagatatatggcgaatcggcatttcaaagtttta
acccacgaagatgttttgaacgagtacctgaagatagtaaatacaattgaaaatgatctt
gaaaacaaactaaatgagcttcggctgcgcaattatacaagagaccgtattgctagagat
aatttcaagagcttattaaaagaaatgccaattaaaatcaaagcaaatactaaatggtcc
gacatttatccttacatcaggtcagatccgcgctttttgcatatgcttggaaggaacggt
tcgtcctgtcttgatttatttttagattttgttgatgaacaaaggatgtacatctttgcg
cagagatcaatagcccaacagacattgatagatcaaaaatttgaatggaataatgctgat
ggcgacgaaatcaccaagaaaaacatagaaaaagttctggcaaatgaccaaaagttcgac
aaggtggataaagaagacatcagtttgattactgatggtttaataaagcaaagaaacgaa
aaaatacagcagaaattcgaaaatgagcgcagaatattggagcaaaagaaacattatttt
tggttacttttgcaaaggacatatacaaaagctggtaagcccaggcccagtacgtgggat
ttggcttccaaagaactaggtgaatcccttgagtacaaggcactaggcgatgacgataat
acaagaaggcaaattttcgaggatttcaagcccgaaagccctgcaccgactgcagaaagc
accaccgcaagcctaacattaaccgcgtcaaaaaagagacatttaagcccggctgtcgaa
ttagactattga

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