Saccharomyces paradoxus: SPAR_L01150
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Entry
SPAR_L01150 CDS
T08193
Name
(RefSeq) Rex2
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
spao
Saccharomyces paradoxus
Pathway
spao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAR_L01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_L01150
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_L01150
Messenger RNA biogenesis [BR:
spao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPAR_L01150
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
Pre-60S particles
RNases
SPAR_L01150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Fic-like_C
Motif
Other DBs
NCBI-GeneID:
54632205
NCBI-ProteinID:
XP_033767836
UniProt:
A0A8B8UVV2
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All DBs
Position
XII:complement(250043..250852)
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AA seq
269 aa
AA seq
DB search
MKWLLFPARTIARTRPGLLLLYKRSISQYLRPRTIENLQSMAQTPEPKTKLFKPLVWIDC
EMTGLDHVNDRIIEICCIITDGHLTPVKAADGQGESHYESVIHYGPEVMNKMNQWCIEHH
GDSGLTAKVLASDKTLAQVEDELLEYIQRYIPDKNVGVLAGNSVHMDRLFMVREFPKVID
HLFYRIIDVSSIMEVARRHNPALQARNPKKEAAHTAYSDIKESIAQLQWYMDNYLKPPQE
TESVESIGPEQPESPSSSTSSLKRQRTDF
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggttactgtttccggcaagaaccatagcacgcacccgacccggcctccttctg
ctgtacaaaagatccatttcacagtacttacgacctcgaaccattgaaaacctgcaatca
atggcacaaacacccgaacctaaaaccaagctgtttaaacccctggtctggatcgactgc
gagatgactggcctggaccacgtaaatgacagaattatcgagatctgttgcatcatcacc
gatggacatctgacgcccgtcaaagcggccgatggccaaggggagtcgcactatgagagc
gtcattcactatggtcccgaggtgatgaacaaaatgaaccagtggtgtatcgagcaccat
ggcgacagtggtctcacagccaaggtcttggcaagtgacaagaccttggcccaggtagaa
gacgagctgctcgagtacatccagcgttacattccagataaaaacgtcggcgtcctggca
ggcaacagtgtgcatatggaccgtttgttcatggtccgcgagtttcccaaggtcatcgat
catctcttttacagaataattgacgtcagcagcatcatggaagttgcccgtagacacaat
cccgctctacaagcacgtaatccaaagaaagaagctgcccacactgcttacagtgacatc
aaagagagcatagcccaattgcaatggtatatggacaactacttgaagccaccacaggag
acagagtcggtcgagtcaatcgggcctgagcagccggagtcaccatcttcatctacctca
tctttgaaaagacaacgcaccgatttttaa
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