Saccharomyces paradoxus: SPAR_L01830
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Entry
SPAR_L01830 CDS
T08193
Name
(RefSeq) Slx4
KO
K15079
structure-specific endonuclease subunit SLX4
Organism
spao
Saccharomyces paradoxus
Pathway
spao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
SPAR_L01830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spao03400
]
SPAR_L01830
DNA repair and recombination proteins [BR:
spao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
SPAR_L01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
Motif
Other DBs
NCBI-GeneID:
54632273
NCBI-ProteinID:
XP_033767904
UniProt:
A0A8B8UVV8
LinkDB
All DBs
Position
XII:404494..406737
Genome browser
AA seq
747 aa
AA seq
DB search
MELQRAQRNLKFLQNEDFMNITDQANLNGESQRAYSLGMETQVPEVQFSLSSDDDSIGTQ
EEHVTAHKLLVAKETTKKDTESNKDVDISFDPTGISQPDLGEPNIVEENVFINTQIQSRL
DDAEEETNLKLKLKQFKYSFKDNNASGCHNNANIVAKRRPAIRKTNPKLKPKTKSKRDPN
IIKNITDFNINNYERSRTASLLKQLSGKHKKVLDIIKTQNEGSNGESSKARNSKSEKATF
DTYSEQEWKYVMKLFLQKFPHSEETDLNEVQKFLYGCEQSSSSLDNQKTSQQKLWTASQL
PPELPDETIQPEQEARIRDTQSAVNFLSLSQVMDDKSEIMKDEESIIMSGGVSTGSQEYG
NKLEPQLTVGNVVDENIELTVGTRINGFSLTDYKAYRHMPVEVNTRCENSKSNDYDDISV
VSDTTDETSTLFPLDQYRYVFLENDEKPPLTTDTIGSTQFFTPNTSPLDGIIDLTQESFK
AVRSLISPLKVENNKTRTTSQALNQVQVPATRTPTIVPQKDLTKALKTEQEMSDIGSFIR
VKLLRKNAGMLNPELMKHSCYRVEANDSEEEETELDDQLCIADIQLADSTKISTEVSIQN
PGNNINDVSDASPTTSPEKLREIIMSQSMKELRQSLKSVGLKPMRTKVEIIQSLQTASQI
LSIANPGNNDEHRGVANFSKIEIFDHLTELIQAFPDFLERIYTFEPIPLNELIEKLFSAE
PFVSQIDEMTIREWADVQGICLRNDKK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggagctccaaagagcacagcggaatctgaagtttttacaaaacgaggattttatgaat
attaccgatcaggctaacctgaatggtgagagccagagggcctattcgttaggaatggaa
actcaagtaccggaagtgcagttttccctatcatctgacgatgattctataggtacgcaa
gaagaacacgttactgcacacaaattacttgtggcgaaagaaacaacaaaaaaagatacg
gaaagtaacaaagatgtcgatataagttttgacccaaccggtatttcccaacctgattta
ggagaaccaaatatagttgaggagaatgtattcattaacacccaaattcaaagccggctt
gatgacgcagaggaggaaacaaatctcaagttaaaacttaagcaattcaagtattcgttc
aaggacaataacgcaagtggctgccacaacaatgcaaatatagtggcaaaaagaaggcca
gcaataaggaaaaccaatccaaaactcaagccaaaaactaagagtaaacgagaccctaat
attatcaaaaatataactgattttaatattaataactacgaacgttcaaggaccgccagc
ttattaaagcaattatctggtaaacacaagaaggttttggatataataaagacccaaaat
gaaggaagcaatggtgaatcttccaaagcaaggaatagcaagagtgaaaaagctactttt
gatacttatagtgagcaggagtggaaatatgttatgaaactttttttacagaagtttcct
cacagtgaggaaacggacttgaatgaagtccagaaatttctatatggatgcgaacaaagt
tcgagttctttagacaatcaaaaaacctcacaacaaaaactttggacagcgtcacaatta
ccacctgagcttcccgatgaaactatccaaccagagcaggaagcaaggatacgagatacc
cagagtgcagtaaatttcttatcgttatcccaagtaatggatgacaaaagtgaaattatg
aaagacgaagaaagcataattatgtcagggggagtttctacaggctcccaagaatatgga
aacaagttagagccacaactaacagtaggaaacgttgttgatgaaaatattgaactaact
gtgggaacacgtataaatggattttcacttaccgattacaaagcttacagacatatgccc
gttgaggtaaatacaagatgtgaaaacagtaagagtaatgactatgacgacatatctgtt
gtttcagatactacagatgagacgtctacattatttccgctagatcagtaccgatatgtt
ttcttagaaaatgatgaaaaaccgccattaaccactgataccataggcagcacgcaattc
ttcaccccaaacacatcaccattggatgggataatcgatttaacacaggaatcattcaaa
gctgttcggtcgttaatatcacctttgaaggtagaaaacaataagacaagaacaacatca
caggcactgaatcaggttcaggtcccagctacaagaacccccacaattgttcctcaaaag
gaccttactaaagcgttaaaaactgaacaagaaatgagtgatataggaagttttatcagg
gttaaattattgcgaaagaacgcaggtatgctaaacccagaactaatgaaacatagctgt
tatagagttgaggcaaatgattctgaagaagaagagacagaattagatgaccaattgtgc
attgctgatattcaattggcagactccaccaaaatttcgactgaagtatccatacagaat
cctggcaacaacattaatgatgtctctgatgcaagtcccacaacttcacccgagaaatta
cgtgaaatcatcatgtcacaatcaatgaaagaacttcgacaaagcttgaaatcagttggg
ctaaaacctatgaggacgaaggtcgaaatcatccaatctttacaaaccgcatcacaaatt
ctctccatagccaacccaggtaataatgacgagcatcgtggggtggcaaatttcagtaag
atagaaatatttgatcatttaaccgaactaatccaagctttccctgattttttggaacgg
atatatacctttgaacccattccactgaatgagttaatcgaaaagctattcagcgccgag
ccgtttgtttcacaaatcgacgaaatgaccatcagggaatgggccgatgttcaaggaata
tgtctgagaaacgataaaaagtag
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