Saccharomyces paradoxus: SPAR_L02300
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Entry
SPAR_L02300 CDS
T08193
Name
(RefSeq) Pwp1
KO
K14791
periodic tryptophan protein 1
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_L02300
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
Other 90S particles
SPAR_L02300
Pre-60S particles
Other pre-60S particles
SPAR_L02300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WDR55
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_WDR3_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
EIF3I
WD40
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_ACSF4
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_IFT140_1st
Pep3_Vps18
SUKH_6
Beta-prop_Nup120_160
Beta-prop_LRRK2
Cas_Cmr5
Beta-prop_RIG_1st
SMI1_KNR4
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
54632323
NCBI-ProteinID:
XP_033767954
UniProt:
A0A8B8UW07
LinkDB
All DBs
Position
XII:<515108..>516838
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AA seq
576 aa
AA seq
DB search
MISATNWVPRGFSSEFPEKYVLDDEEVERINQLAQLNLDDAKATLEEAEGKSGVEGDAGT
GGSDKLKDQLDIDDDLKEYNLEEYDEEEIADDEDGKDVSMFPGLSNDSDVKFHEGEEGED
PYISLPNQEDSQEEKQELQVYPSDNLVLAARTEDDVSYLDIYVYDDGAGFHSSDIPVEEG
DQADPDVARGLVRDPALYVHHDLMLPAFPLCVEWLDYKVGSNSEEAANYAAIGTFDPQIE
IWNLDCVDKAFPDMILGEPLDNSMASLKSKKKKKKSKTEHITTHHTDAVLSMAHNKHFRS
VLASTSADHTVKLWDLNSGNAARSLASIHSNKNVSSSEWHMLNGSVLLTGGYDSRVALTD
VRISDESQMSKHWSVMSGEEIETVTFASENIILCGTDSGNVYSFDIRNNENHKPVWTLKA
HDAGISTLCSNKFIPGMMSTGAMGEKTVKLWKFPLDEAKNARGPSMVLSRDFDVGNVLTS
SFAPDIEVAGTMVIGGVNKVLKLWDVFTNRSIRKSFKSELEDVQARAKQEAKQLGKSSRI
ARKYTSNDNPDTVLTIDDQGEDEEEREGEDEHDNMA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgctacaaattgggtcccaagagggttttcatcggaatttcctgaaaaatat
gttttagatgatgaggaggtggaaagaatcaaccaattagcacaattgaatttggatgat
gctaaagctactttggaggaagccgaaggaaaatcgggtgtcgaaggtgacgccgggaca
ggtggttctgataagttgaaggatcagctagacatagacgatgatttgaaagagtataac
ctcgaagaatatgacgaagaagaaattgctgatgatgaagatggtaaagatgtatccatg
tttcctggcctaagtaatgatagcgatgttaaatttcatgaaggtgaagaaggtgaagat
ccatatatttcattgcctaatcaagaggatagccaagaggagaaacaggaattacaagtt
tatccatccgataatttggttcttgccgcaagaacagaagatgatgtttcgtatctggat
atctatgtttacgacgatggtgccgggttccacagcagcgatattcccgttgaagaaggt
gatcaggctgacccagatgttgctcgtgggttagttcgtgatcctgcactatacgttcac
catgacttaatgttgccagctttcccattatgcgtggagtggcttgactacaaggttgga
tccaattccgaagaagctgccaattatgctgcaattggtacgtttgacccacaaattgaa
atttggaacttagactgtgtcgacaaggccttcccagatatgattctgggtgaacccctt
gacaattcaatggcatctttgaaaagcaaaaagaaaaagaagaagtctaaaactgaacac
atcaccactcatcacaccgatgctgttttgtccatggcacacaacaaacatttccgttcc
gttttagcatccacctccgcagatcatactgtaaaactatgggatttgaactcaggtaac
gcagcccgctctttggcttccattcattcgaacaaaaatgtttcatcatccgagtggcac
atgttgaatggttccgttcttttgaccggtggttatgattctcgagtggctttaactgat
gttagaatttccgacgaaagtcaaatgagtaaacattggtctgtcatgtcaggtgaagaa
atagaaaccgttacatttgccagtgaaaatataatattatgtggtactgattctggtaac
gtatattctttcgatattagaaacaatgaaaaccataaaccagtttggacattgaaggca
catgatgccggtatctccacattgtgttcgaataaattcattcccggtatgatgagtact
ggagctatgggtgaaaagactgttaaattatggaaattccccttggatgaagctaaaaat
gctaggggtccaagcatggttctgtctcgtgattttgacgtcggtaatgtcttgacatca
tcatttgccccagatatcgaagtagcgggtaccatggttattggtggtgtcaataaggtt
ttgaaactatgggatgttttcaccaatagatccatacgtaaaagcttcaaaagtgaatta
gaggatgtgcaagcaagagccaaacaggaagccaagcaactaggaaaaagttcaagaatc
gcaagaaaatacaccagtaacgataacccagatactgttctaaccattgacgatcaaggt
gaagacgaggaagaaagagaaggtgaagatgagcatgataacatggcataa
DBGET
integrated database retrieval system