KEGG   Saccharomyces paradoxus: SPAR_L02530
Entry
SPAR_L02530       CDS       T08193                                 
Name
(RefSeq) Utp13
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
spao  Saccharomyces paradoxus
Pathway
spao03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SPAR_L02530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spao03009]
    SPAR_L02530
Ribosome biogenesis [BR:spao03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SPAR_L02530
SSDB
Motif
Pfam: WD40 WD40_Prp19 Utp13 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_RIG_1st Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 WD40_like Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Ge1_WD40 Beta-prop_NOL10_N Beta-prop_WDR11_2nd VPS8_N Beta-prop_LRRK2 PorB Hira
Other DBs
NCBI-GeneID: 54632346
NCBI-ProteinID: XP_033767977
UniProt: A0A8B8UW32
LinkDB
Position
XII:complement(550566..553019)
AA seq 817 aa
MDLKISYKGVSLNPIYAGSSAVATVSENGRILATPVLDEINIIDLTPGSRKILHKISNED
EQEITALKLTPDGQYLTYVSQAQLLKIFQLKTGKVVRSMKISSPSYILDADSTSTLLAVG
GTDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKTWLLASGDTNGMVKVWDLVKR
KCLHTLQEHSSAVRGLDIIEVPDSDGPSLQLLSGGRDDIINLWDFDMKKKYKLAKTLPVN
QQVESCGFLKNRDGKRIIYTAGGDAIFQLIDSESGTVLKRTNKPIEELFIIGVLPIMNNS
QMFLVMSDQTLQLINVEEDLENDDGIIQVTSSIAGNHGIIADMRYVGPELNKLALATNSP
SLRIIPIPDLTEAEASLPLDVEIYEGHEDLLNSLDATEDGLWIATASKDNTAIVWRYNEN
SSKFDIYAKYIGHSGAVTAVGLPNIMPKGYPEFLLTASNDLTIKKWVIPKPTVTKSVQII
KVSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVS
FCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIK
IWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQFWKDCTEQEKEQEQEKAK
LQVEQEQSLQNYMSQGDWTNAFLLAMTLDHPMRLFNVLKRALGESRSRQDIEEGKSGVIF
NEELDEAISTLNDEQLTLLMKRCRDWNTNAKTHTIAQRTIRCILMHHNIAKLSEIPGMVK
IVDAIIPYTQRHFTRVDNLVEQSYILDYALVEMDKLF
NT seq 2454 nt   +upstreamnt  +downstreamnt
atggatttaaaaatctcatataaaggtgtatcattaaatcctatctatgcgggaagcagt
gctgttgccactgtctcagaaaatggtagaatactagctactccagtgcttgatgaaatc
aacataattgatctaacaccaggttcaagaaagattttacacaagatctctaacgaagat
gagcaggaaataaccgcgttgaaactaactcccgatggacaatatctcacatacgtttcg
caagcccaacttttaaagatctttcaactaaagaccggaaaagttgtcagatcaatgaag
atttcctccccatcatacattcttgacgcagattcaacttcgactcttctggcagtcggc
ggaacagatggtagtataattgttgtggatatcgaaaatggttacattactcattcgttc
aaaggtcatggtggtacgatttccagcttgaaattttatggacaattgaatagtaaaaca
tggttattagcgtccggtgacacgaatggtatggtaaaagtatgggatcttgttaaaagg
aaatgcttacacacattacaagagcactcttctgccgtgagagggttggatataatcgag
gtaccagatagcgatggaccaagcctgcaattactttccggtggtagagatgatattatt
aatctctgggattttgatatgaagaagaaatataaattggcgaaaacccttccagtaaac
caacaggtagagtcatgcggattcttgaagaaccgtgacggtaaacgcataatttataca
gccggtggtgatgcaatctttcaattaattgactctgaatccggtactgtgctcaaaagg
accaacaaacctatagaagagttattcattattggtgttcttccaataatgaacaattca
cagatgttcttggtaatgtctgatcaaactttgcaactaattaacgttgaagaagatttg
gagaatgatgacggcataatacaggtcacttcgagcattgctggtaaccatggtatcatt
gctgacatgagatatgttggcccagagctaaacaaattggcattggccaccaattctcca
tcgctaagaataatacccatccccgatttaacagaggccgaggcttcgctgcctttggat
gttgaaatttatgaaggtcatgaagatttgctaaactcattagacgctactgaagatggg
ctatggattgcaaccgcctctaaagataatacggctattgtttggagatataatgaaaac
agcagtaagtttgacatttatgctaagtatattggacattcaggcgcagtaacagcagtt
ggattgccaaatataatgccaaagggatatcctgaatttttattgacagcatcaaatgat
ttaaccattaaaaaatgggtaattccaaagccaactgttactaagagtgttcaaattatc
aaggtatccgaatatactcgtcatgctcatgaaaaagacatcaatgctttgtcagtctct
cccaacgattctatttttgcaacagcgtcatatgataaaacttgtaagatctggaacctc
gaaaatggtgaattggaagccacgttggccaaccacaagcgtggactatgggatgtgtcg
ttttgccaatatgacaaattattggcaacatcttcaggtgataagaccgtcaaaatatgg
tcattggatactttcagcgttatgaagacgttggaaggtcataccaacgcggttcaaaga
tgttcctttattaataagcaaaaacaattgataagttgcggtgcagatggcctgatcaaa
atatgggattgctctagcggtgaatgtctgaagactttggatggtcataataataggctg
tgggctttaagtacaatgaatgatggtgatatgatcgtgagcgctgatgcagatggtgtt
tttcagttttggaaagattgtaccgaacaagaaaaagaacaagaacaagaaaaggctaag
ttacaggtcgaacaagaacaatcgcttcaaaattatatgagccaaggtgattggacaaat
gcatttttattagcaatgactttagatcacccaatgaggttatttaatgttttaaagaga
gctctgggtgagtcaagatctaggcaagatatcgaagaaggcaagagtggagtcattttc
aatgaagaattggatgaagccatttctactctaaatgacgaacaattaacgttgttaatg
aaaagatgcagagattggaatacaaatgccaaaacacacactatagcgcaaagaactata
agatgcattttgatgcatcataacatagcaaaattaagtgaaataccggggatggtaaag
atagtcgatgcgataattccatacacacaaagacatttcacaagggtggataatttagtt
gaacaaagttacatattagattacgcattggtggagatggacaagcttttttag

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