Saccharomyces paradoxus: SPAR_L04150
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Entry
SPAR_L04150 CDS
T08193
Name
(RefSeq) Utp21
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
spao
Saccharomyces paradoxus
Pathway
spao03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SPAR_L04150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spao03009
]
SPAR_L04150
Ribosome biogenesis [BR:
spao03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SPAR_L04150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_LRRK2
Beta-prop_HPS5
Beta-prop_VPS8
WDR54
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
54632508
NCBI-ProteinID:
XP_033768139
UniProt:
A0A8B8UWJ4
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All DBs
Position
XII:complement(894398..897217)
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AA seq
939 aa
AA seq
DB search
MSIDLKKRKVEEGVRSKGKNSKVFSPFRIIGNVSNGIPFATGTLGSTFYIVTSVGNTFQI
YDANTLHLLFVSEKETPSPIVALSAHFHYVYAAYENKVGIYKRGVEEHLLELETDASVQH
LCVFGDYLCASTDDNSIFIFKKSDSQDKYPSEFYTKLTVAEIQGGEIVSLQHLATYLNKL
TVVTKSNVLLFNVRTGKLVYTSNEFPDQITTAEPAPVLDIIALGTITGEVIMFNMRKGKK
VRTIRIPQSRVSSLSFRTDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTE
ATFLNGQPIIVTSGGDNSLKEYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSCIAFAD
SQSHFMLSASKDRSLWAFSLRKDAQSQEMSQRLHKKQDGGRVGGSTIKAKFPEIVALAIE
NARIGEWENIVTAHKDEKFARTWDMRNKRVGRWTFGTTDDGFVKSVAISQCGNFGFVGSS
NGSITIYNMQSGILRKKYKLHKRAVTGIALDGMNRKMVSCGLDGIVGFYDFNKSTLLGKL
KLDAPITSMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRWI
VSASLDSTIRTWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTGNGICIWTNRAQF
KAVSTRTIDESEFERMALPSTSVRGNDSMLSGALESNEGEDLNDIDFTTYTSLEQIDKDL
LTLSIGPRSKMNTLLHLDVIRQRSKPKEAPKKSEKLPFFLQLSGEKVGDEASGREGIAHE
TPEEIHRRDQEAQKKLDAEEQMNKFRVTGRLGFESHFTKQLREGSQSNDYSLLLATLINL
SPAAVDLEIRSLNSFEPFDEIVWFIDALTQGLKSNRNFELYETFISLLFKAHGDVIHANN
KNQDIAIALQNWENVHKNEDRLDDLVKFCMGVANFVTTA
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgacttgaaaaaaagaaaagttgaagaaggtgtaagaagtaaagggaaaaat
tctaaagtattttccccattcaggattattggtaatgttagtaatggtattccttttgct
actggtacgttgggctctaccttctacattgtaacaagtgttggaaatacatttcaaata
tacgatgcgaataccttacatttactttttgtttccgagaaagaaacaccatctccaatt
gtagcattatctgcacactttcactacgtgtacgcagcatatgaaaacaaggttggtatt
tacaagaggggtgttgaagaacatttgcttgaattagaaactgacgcaagtgtccagcat
ttgtgcgtatttggtgattatctttgcgcttccaccgatgacaattccatttttatattc
aagaagtccgattcgcaagataaatacccatcagaattctatactaaacttaccgttgct
gaaattcaaggtggcgaaattgtgtctttacaacatttggcaacttatttgaataaatta
actgtggttaccaaatccaacgttttgcttttcaacgtcagaactgggaagcttgtttac
acatcgaacgaatttcccgaccaaattacgaccgctgaaccagcaccagtcctggatatc
attgccctaggtacgattaccggtgaggttattatgtttaatatgagaaaaggtaagaaa
gtccgcacaattaggattccgcaatcaagagtctcatcattgagttttaggaccgatggt
tcttcccatttaagtgtaggaacaagcagtggtgatctaatcttctatgatttggaccgt
cgttcaagaatacatgttctgaaaaacattcacagagaatcatacggtggtgtcactgag
gctacttttttgaatggtcaacctattattgttacatcaggtggtgacaattcgctaaaa
gaatacgtcttcgacccgtcattatcccagggaagcggtgatgtagttgttcaaccacca
agatatttacgttccagagggggccattctcagccaccttcctgcattgcgtttgctgat
tcccaatcacacttcatgctatcagcatccaaagatagatcactttgggccttttctctg
cgtaaagatgcacaatcacaagaaatgtctcaaagattacacaagaagcaagatggcggc
agggtaggtggtagtacaatcaaagctaagtttcctgaaatagtagcgcttgcaattgaa
aatgctagaataggtgaatgggaaaatattgtcactgcacataaggatgaaaaatttgca
agaacctgggatatgcgaaataaaagagttggtaggtggacttttggtactactgatgat
ggatttgttaagtctgtggccatctctcaatgtggtaattttggatttgtcggatcctct
aatggttccattaccatttataatatgcaaagtggtatactccgtaaaaagtataaattg
cacaaaagggcagttaccggtatagccttagacggtatgaatcgtaaaatggtttcttgt
ggactagatggtatcgttggtttttatgacttcaacaagtcaacattgttgggtaaattg
aaattggatgctcctattacctcaatggtctatcatcgttcttctgatctatttgctttg
gctttagacgacttatcaattgtggttattgacgcagttactcaaagggttgtccgtcaa
ttatggggtcatagtaacaggatcactgcatttgatttctctcctgaaggccgttggatt
gtttctgcttctctagattccaccattaggacttgggatcttccaaccggaggatgcatc
gatggtatcatagtagataatgttgccacaaatgtaaagttttctccaaatggtgatttg
cttgccactacacatgttaccggtaatggtatatgtatctggaccaacagagcgcaattc
aaggcagtctcgaccagaactatcgatgagtctgaatttgaaagaatggccttacctagc
acatctgttagggggaatgactcgatgctgtcgggggctttagaaagcaatgaaggagaa
gacctaaatgatattgatttcaccacttatacatcattggaacagatcgataaggatctg
ttgacattatctataggaccgagaagtaagatgaacacattgcttcatttggacgttatc
agacaacgttctaagccaaaggaagctccaaagaaatcagaaaagcttccatttttctta
caactatctggagaaaaggttggagatgaagcctctggaagagaaggtatagcacatgaa
acaccagaagaaatccatcgcagggatcaagaagcacaaaagaagttagatgcagaagag
caaatgaataaatttagagtcacaggaaggttaggatttgaatcacattttacaaagcaa
ttacgagagggttcacaatctaatgactattcattattgctggctacactaataaacctc
tcgcctgccgcagtggatttagagataagatcattgaattcctttgagccatttgatgaa
attgtatggttcatcgatgcgttaacacaaggattgaagagcaataggaattttgaactc
tatgaaacgtttattagtttactgttcaaggcacacggcgatgttattcacgccaacaac
aagaatcaagatattgccattgctcttcaaaattgggagaatgtacataagaacgaagat
agattggatgatcttgtcaagttttgcatgggagtggcaaattttgtcaccaccgcgtaa
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