Saccharomyces paradoxus: SPAR_L04240
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Entry
SPAR_L04240 CDS
T08193
Name
(RefSeq) uncharacterized protein
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spao03012
]
SPAR_L04240
Enzymes [BR:
spao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPAR_L04240
Translation factors [BR:
spao03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SPAR_L04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSRM_DHX29
RWD
Helicase_C
DEAD
OB_NTP_bind
AAA_19
nSTAND3
PhoH
AAA_22
ResIII
AAA_29
ATPase
T2SSE
Cas3-like_C_2
FtsK_SpoIIIE
AAA_25
NPHP3_N
AAA_16
ABC_tran
Sigma54_activat
Zot
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
54632517
NCBI-ProteinID:
XP_033768148
UniProt:
A0A8B8UWP3
LinkDB
All DBs
Position
XII:912498..916808
Genome browser
AA seq
1436 aa
AA seq
DB search
MAKKTKSNSKNSTPVNDVPVAAGKKKAKGKKGQEQEPEDDKRAKQQSNRAKVTSTASWTG
KLPHTILHETCQKRKWNKVEYDMKKIGDKGFIAIAVLSFTDPKTKETLTTRMSDPTYDKA
SGKGIVIPQETPVEARHIASTIALYRVAYNTNLHMMLPPNHRKTWYALDDFRKDNLKTNE
KRINKLFDLDPFKTMVEDRKLKLQREKDQAAQNNQAQKEQVAQTILSSHSGLSSSRKNPK
ERKSTSHKHSHNPSLVRFPKKVWENSIFVDLDESSRQLIETSLKEKIDWQNKKITHNNNT
ITEDREDLKAKLLTLQFRPKHVEEAMLYKDPLSFLLFNLPEDDLPPFFHKKKGDTKNKVE
ISNLPLSTRMIIERLTEIGVSSDEALLALQQNDMNENEAAGFLTRENLPTLNNNTNETVS
ETESIECWNQELESLESIYEGCVMDTKENSHYTLNLIEKLKIKLKVYRTKNYPASLPGIV
VSTFDKNYKLPDYIKKQILTKLLHYLQEGNLIGDMLVYHIYEWLKDNIFEIIDNPGPLVP
ELDSKSTINKRNIPNGKKNTNNSSSRKFVKNTISEDMLCVLKEEYIKRIKSPEYKNMQLI
REQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFVLDFLQREESDFGKTRIVCT
QPRRISAIGLAERVSDERCVACGDEVGYVIRGVNKTKAFTRIKFMTTGVLVRLLQNARTM
LEDTIVVIDEVHERSIDTDLIVTLMKNLLHKVRGMKIVLMSATVNVDLFKKFFPGLATCH
IEGRTFPITDYFLEDILDDLDFKIKREKALYYGDDDNADERSNDDQYLKPRADSKFFSSG
QINYDLLCQVVEHVDKRLKDADNNGSIIVFLPGVGEINKCCNLLANKTNGVDFIVLPLHS
ALTPEDQKRVFKKYHRKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLI
ESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMIPMPIPEIKRIPLESLYLSVKAM
GVKDVKAFLSTALDAPPLPALQKAERILTTVGLVDEFDKSLTQLGQFISLMPVMDSKHGK
LLIYGILFGCTDICVLLVSILGIGALPFIGGFENREKIKRVLCKYESRGDLFAVLEVVKG
YLKIKDPTTKRKYLRDHLLSYNKINEIKSSRAQYYSILKDVGFLPMGYKAGNISDLNRNE
RNFDILRAILTGAFYPHVARVQLPDVKYLSTSSGAVEKDPEAKMIKYWIRSEEYQDKLEE
YKTNNSQETQKVDLEDLPLPATRAFIHPSSVLFSTNSVNLEDAKLLSEIEGPISRQSKIP
TVVRYPFVLFTTSQVTNKLYLRDLTPTTTLSLLLFGGAISYDIGGTIHSPGIIVDNWLPI
RTWCKNGVLIKELRTQLDEAIRKKLESPDYAKKSQIDNSDADKTLKIVEKIVASEQ
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaaacgaaaagtaactcgaaaaattcgactccagtgaatgacgtaccagta
gctgctggtaaaaagaaggcaaaaggaaaaaagggacaagaacaagagccagaagatgac
aaaagggccaagcaacaaagtaatagagcaaaggtaacatccacagcgagctggacaggt
aagttacctcacacaatcttacacgaaacttgtcagaaacggaaatggaataaggtagaa
tatgatatgaaaaaaataggtgataagggtttcattgccattgcagttttgtcgtttact
gacccaaagacaaaagaaacattaaccacaagaatgagcgatccgacgtatgataaagct
tcaggaaaaggcattgttattcctcaagaaactccagttgaagctagacacatagcttcc
actattgcgctatatcgcgttgcatataacactaacctgcacatgatgcttccgccaaat
catagaaaaacatggtacgccctcgatgactttcgcaaggacaacctaaaaacgaacgaa
aagcgtataaacaaattatttgatcttgatcccttcaagacaatggtggaagataggaag
ctcaaactccaacgtgaaaaggaccaagctgcacagaataaccaagcacagaaagaacaa
gttgcacaaactatcctatccagccatagcggactttcttcctcccgaaagaatccgaaa
gagagaaaatcaacatcccataaacactcacacaatccttcattagtacggtttccaaaa
aaagtttgggaaaattctatattcgtcgaccttgatgaatcttctagacaactgatagaa
acctcattgaaagaaaaaattgattggcaaaataaaaaaattacccataacaataacacg
atcactgaggatcgggaagatcttaaggcaaaattgttaactttacaattcaggccaaag
cacgtagaggaggccatgctttataaagatccattgtctttcttattgtttaacttacca
gaagatgatttgccaccattttttcataagaagaaaggtgatacaaaaaacaaggttgaa
atatcgaatctacccttatcgactagaatgatcattgagcgtttaacagaaattggcgtc
tcctcagatgaggctttattggctttacaacaaaatgatatgaatgaaaatgaagcagct
gggttcttgacgagggaaaatttaccaactttaaataacaatacaaatgaaactgtatcg
gaaacagaatctatagaatgttggaatcaagagctagagagcctagaaagcatttatgag
ggctgcgtgatggacaccaaggaaaattctcactacacgctcaacttaatcgaaaaactc
aagataaaattgaaagtatatagaaccaaaaattatcctgcatctttgcctggaattgta
gtttcaacttttgataaaaattacaaactacctgattatattaaaaagcaaatactaacc
aagttattgcactatctccaagaaggcaatctaataggtgatatgttagtatatcatatt
tatgaatggttaaaagacaatatattcgagataattgataaccctggcccattagttcca
gaattagactcgaagagtacaataaacaagagaaacattccaaacggtaagaaaaataca
aacaattctagttcaagaaaatttgtaaagaataccatctctgaagacatgctttgtgtt
ttaaaggaagaatatataaaaaggattaaaagccctgaatacaaaaatatgcagttaatc
agagaacaactgcctgcttggaagaagcaaaaagttattatagatattatcaataaaaat
gaggttgtattgattactggtgaaacaggttcgggtaaatccactcaagtcgttcagttt
gttttagatttcctacagagggaagaaagcgattttggtaaaactagaatcgtatgtaca
caacctagaagaatctccgctattgggcttgctgaacgtgtttccgatgaacgctgtgta
gcttgtggtgatgaggtgggttacgtaataaggggtgttaataaaaccaaagctttcaca
cggatcaagttcatgaccacgggtgttcttgttaggttgttacaaaatgccaggacgatg
ttggaagatacaatcgttgttattgatgaagtccatgaacgttccattgatacggatttg
attgtgacattaatgaagaatctcctacacaaagttcgtggaatgaaaattgttctaatg
agtgctacagtcaacgttgatctgttcaaaaaattctttccaggattagcaacatgtcac
atcgaaggacgtacttttcctatcacagattatttcttggaagatattctggatgacctg
gacttcaaaatcaagagagaaaaggcgttatattatggtgatgatgataacgctgatgaa
agaagtaatgacgaccagtatttgaagccaagggcagattctaagtttttttcttctggg
caaattaattatgatttgctttgccaagttgtagagcacgtagataaacgcctgaaagat
gctgacaacaacggatccattatcgttttcttacctggtgtgggcgaaattaataagtgc
tgcaatttgctggctaataaaacaaatggagttgattttatagtattgcccttgcattca
gctctaactcctgaggaccaaaaaagggtatttaaaaaatatcacagaaagagaaaagtt
gttgtatctacaaatattgctgaaacttctattactatagatgactgtgtcgcaactatt
gacactggccgtgccaaatcgatgttctataatccaaaggataatactacaaaactgatt
gagtcatttatttcaaaagctgaagttaaacaacgtagaggccgtgctggtagagtgcgt
gaaggtttatcttacaagttattttctaaaaatttgtacgaaaacgacatgataccaatg
ccaatcccagaaattaaaagaatcccattagaatcgctttatttatctgttaaagccatg
ggcgtaaaagacgttaaggcgtttttgagtacagctttggatgcccctcctttgccagct
ttacagaaggcagaaaggatcctaacaacggtaggacttgtagatgagttcgacaagtcg
ctcacacaactaggtcaatttatcagtttgatgcctgttatggatagtaagcatggtaaa
ttgctaatttacggtattttgtttggttgtacggatatttgtgttttacttgtctcgata
ctcggtattggagctttgccctttatcggaggttttgaaaatagagaaaaaataaagagg
gtgctatgcaaatatgaaagtcgtggggatttattcgcagtattggaagttgtcaaaggt
tacttgaaaatcaaagatccaaccaccaaaagaaaatacttgagggaccatttactttcc
tataacaaaattaatgaaatcaaatcatcaagagcccaatactattctattttgaaagat
gtaggctttctaccgatgggttataaagctggaaacatctctgatttgaatagaaacgag
cgaaattttgatatcctaagggccattctcacaggagcattctatccacacgtagccagg
gttcagctgccagatgtaaaatatttatcaacaagttctggggcagtagaaaaggatcct
gaagccaaaatgatcaaatactggattagaagcgaagagtatcaagacaaattggaagaa
tataagacaaataattcgcaagaaacgcaaaaagttgatttggaagatttgccgttacct
gctaccagggcattcattcatccaagttccgttttgttttcaaccaattcagtaaacttg
gaagacgctaaattactctctgaaatagaaggtccaatttctcgtcagtccaaaatacca
accgttgtaagatatccatttgtgttgtttaccacatctcaagttactaacaagttgtat
ttgagagacttaaccccaactaccacattgtcattactattattcggcggggcgatctct
tatgatattggaggtactattcattcaccgggcattattgttgacaattggctcccaatt
aggacctggtgtaagaatggtgttttgatcaaggaattgagaacacaacttgatgaggcc
ataagaaagaagttagaaagtcccgattatgctaaaaaatctcaaattgataattctgac
gctgataaaactctaaaaattgttgaaaaaattgtagcttccgagcaatag
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