Saccharomyces paradoxus: SPAR_M00870
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Entry
SPAR_M00870 CDS
T08193
Name
(RefSeq) Prp39
KO
K13217
pre-mRNA-processing factor 39
Organism
spao
Saccharomyces paradoxus
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spao03041
]
SPAR_M00870
Spliceosome [BR:
spao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SPAR_M00870
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
DUF6201
WH_KIN17
Sda
Motif
Other DBs
NCBI-GeneID:
54632664
NCBI-ProteinID:
XP_033768274
UniProt:
A0A8B8UWX7
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Position
XIII:186416..188305
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AA seq
629 aa
AA seq
DB search
MSDETNFTIEEIEPRPDALRGLDTQFLQDNTSLVQAYSGLDWSDISSLTQMVDVIEQTVV
KYGNPNDSIKLALETILWQILRKYPLLFGFWKRFATIEYQLFGLEKSIAVLATSVKWFPT
SLELWCDYLNVLCVNNPNEKDFIRNNFEIAKGLIGKQFLSHPFWDKFIEFEVGQENWLNV
QRIYEYIIEIPLHQYARFFTSYKKFLNEKNLKATRNIDTVLRRTQTIVNEIWQFESKIKQ
PFFNLGQVSNDDLENWSRYLKFVTDPSKSLDKGFVMSIFDRCLIPCLYNENTWMMYIKWL
TKEDLSDEVLVDVYQKANKFLPLDVKTLRYDFLRFLKRKYRSNNTLFNKIFNETVSLFLK
IWPNDISLMTDYICMLKRHSFKNSLDQPPKEILEKQTSFTKILETSITNYINNQIDAKVH
LQTLINDKNLSMVVVELIKTTWLVLKNNMQTRKYFNLYQKNSLIKDSVPFWLTYYKFEKS
NVNFTKLNKFVKELGVEIYLPTTIMNDILTDYRTFYVTHSDIVTYESSIVDSNTFDPILY
PELKMSNPKYESIVDIKASAEWNKRTEWKEAGHVGIMTERPQISNSIIECNSGNLVKRPI
SLPNFRNLEKINQLKVNDLYTEEFLKQNK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgaaacaaactttacaatagaagaaattgagcctagacctgatgcgcttcga
ggtctagacacccagttccttcaagataacacatcattggtgcaagcttacagtggttta
gactggtctgatatttcttcgttgactcaaatggtagatgttatagagcaaacagtagtt
aaatatggcaacccgaatgattcaataaaattggcccttgagactattctatggcaaata
ctgcgtaagtaccccttattgtttggattttggaagaggtttgctactattgagtaccag
ttatttggcctcgagaaatcgatcgctgttctcgccacttccgttaaatggttcccaact
tctctggagttatggtgtgattatttgaatgtgttgtgtgtcaataacccgaatgaaaag
gactttattagaaataattttgaaattgcgaagggccttattggtaagcagtttctgtca
caccctttttgggataagtttatagaatttgaagttggacaggagaactggcttaacgtc
caacgaatatacgaatatattatcgaaatccctctacatcagtacgcaaggtttttcaca
tcttacaagaagtttttaaatgaaaaaaacctgaaggctacaagaaacattgatacagtc
ttaagaaggacacaaacaattgtaaatgaaatttggcagttcgaatcaaaaatcaaacag
ccctttttcaacctgggtcaagtttcaaatgatgatttggaaaattggtcgcgatatttg
aaatttgtaacagatccttcaaaatcactggataagggattcgtaatgtcaatttttgac
agatgtttgattccttgtctttacaatgaaaatacgtggatgatgtatattaaatggcta
acaaaggaagatttatctgatgaagtactagtggatgtttatcaaaaagccaataagttt
ttaccactagatgtcaagactttgagatatgattttcttaggtttttgaaaagaaaatac
cgatcaaataataccttattcaataagatattcaatgaaacagtatcgctttttttaaag
atttggcccaacgatatttcacttatgacagactatatttgtatgttgaaaagacattct
tttaagaattccttagaccaaccgcccaaagaaattttagagaaacagacatcgttcact
aaaatcttagagacatcaatcaccaactacataaataatcaaattgacgccaaggtgcat
ctacagactttaataaacgacaaaaacttaagtatggtagtggtagaactgataaagact
acctggcttgtacttaaaaataatatgcaaacaaggaagtatttcaatctttatcaaaaa
aattctctcattaaagattccgtaccgttctggttaacttactacaaatttgaaaagagt
aatgtgaattttaccaagctgaataaatttgttaaggagcttggcgtagaaatatacttg
ccgaccacaataatgaatgatattttgacggactacaggactttctatgtaacgcattcg
gatatcgtaacgtatgaatcctccattgtggattcgaatacatttgaccctattttatat
cctgagctaaaaatgtcgaatccaaaatacgaatcgattgtggatattaaagcaagtgca
gagtggaataaaaggacggaatggaaggaggctggtcacgtcggcataatgacagaaagg
ccgcagatatcgaacagtataattgagtgcaattcaggaaatttggttaaaaggcctatt
agtctaccaaattttagaaacttggagaaaattaatcaactcaaggttaatgatttatac
acggaagaattccttaagcaaaataaatga
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