KEGG   Saccharomyces paradoxus: SPAR_M01800
Entry
SPAR_M01800       CDS       T08193                                 
Name
(RefSeq) Rna14
  KO
K14408  cleavage stimulation factor subunit 3
Organism
spao  Saccharomyces paradoxus
Pathway
spao03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SPAR_M01800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spao03019]
    SPAR_M01800
Messenger RNA biogenesis [BR:spao03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     SPAR_M01800
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_PRP39_C TPR_14
Other DBs
NCBI-GeneID: 54632757
NCBI-ProteinID: XP_033768367
UniProt: A0A8B8UX75
LinkDB
Position
XIII:<376112..>378145
AA seq 677 aa
MSSSTTPDLLYPSADKAAGSSDNIHGDELRLRERIKDNPTDILSYFQLIQYLETQESYAK
VREVYEQFHNTFPFYSPAWTLQLKGELARDEFETVEKILAQCLSGKLENNDLSLWSTYLD
YIRRKNNLITGGQEARAVIVKAFQLVMQKCAIFEPKSSSFWNEYLNFLEQWKPFNKWEEQ
QRIDMLREFYKKMLCVPFDNLEKMWNRYTQWEQEINSLTARKFIGELSAEYMKARSLYQE
WLNVTNGLKRASPINLRTANKKNIPQSGTSDSNIQQLQIWLNWIKWERENKLILSEDVLS
QRINYVYKQGIQYMIFSAEMWYDYSMYISENSDRQNILYTALLANPDSPSLTFKLSECYE
LDNDSESVSNCFDRCTQTLLSQYKKIASDINTSEDNNTGNEQEMVYKQREKLTFVFCVYM
NTMKRISGLSAARIVFGKCRKLKRILTHDVYVENAYLEFQNQNDYKTAFKVLELGLKYFQ
NDGVYINKYLDFLIFLNKDSQIKTLFETSVEKVQDLTQLKAIYKKMISYESKFGNLNNVY
SLEKRFFKRFPQENLIEAFTSRYKIQNSNLIKKLELTYMYNEGEDSYFSSGNKNGDHGSS
NMNSSDRKRLMEETGNNGNFSNKKFKRDSELPTEVLDLLSVIPKRQYFNANLLDAQKLVN
FLNDQVEIPTVDSTKSG
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgtctagctctacgactcctgacttattatatccctctgcggataaagctgcagggtct
agtgacaatatacatggagatgaattacgacttagagaaaggattaaagacaaccccacc
gatattttatcttatttccaactcattcaatatttagaaactcaagagtcgtacgctaaa
gtgagagaagtatacgagcagtttcataacacattcccgttttattcacctgcgtggact
ttacaattgaagggtgaattggcaagagatgaatttgagacggttgagaagattctggcg
caatgcctttctggtaagttggaaaataatgacctatctctttggtcaacatatttggac
tacatacgcaggaaaaacaacttaatcaccggtggacaagaagcgagagccgttattgtc
aaggcattccaattagttatgcaaaagtgtgcaatttttgaacccaagtcatcctctttt
tggaatgaatatctcaatttcttagagcagtggaagccattcaacaaatgggaagagcaa
caacggattgacatgctcagggaattctacaagaaaatgttatgtgttccctttgataat
ttagagaaaatgtggaatagatacactcaatgggaacaagaaataaattcgctaacagcc
agaaagttcattggtgaattatcggccgaatacatgaaagcccgttccttgtaccaagaa
tggctgaatgttactaatggattgaaaagggcatccccaatcaatctgcgcacagcaaac
aagaaaaacataccacaatcaggtacatcagactcaaacattcagcagttacaaatttgg
ttgaattggataaagtgggaaagggaaaataaattaattcttagtgaagatgtgctatca
caaaggatcaattatgtttataaacaaggtattcaatacatgatattttctgctgaaatg
tggtacgattattcaatgtatatatctgaaaattcggatcgacaaaatatcttatatact
gcgttattagctaatcccgactcaccttctcttacattcaaattatccgaatgttacgaa
ctggataatgattctgaaagtgtttctaactgctttgacagatgtactcaaactttgcta
tcgcaatataagaagattgcttccgatataaatacgagtgaagacaataacacagggaat
gaacaagagatggtatacaaacaaagggaaaaattaacattcgtattttgcgtgtatatg
aatacgatgaaaagaatatcgggactgtccgcagcacgtattgtattcggtaaatgtcgt
aaactgaaacgtatattaacacatgacgtctacgtggaaaatgcatacttagaatttcaa
aatcaaaatgattataagacagcttttaaggttctagaactgggtttgaaatacttccaa
aacgatggagtttatatcaacaaatacttagattttttaatatttttaaataaggattca
cagatcaaaaccttatttgaaacatccgtggaaaaagttcaagatttaacccagttgaag
gcaatatacaagaaaatgataagttatgaatccaagtttggcaacttaaacaacgtttat
tctctggagaaaagattttttaaaaggttcccccaagaaaatttaattgaggctttcaca
agccgttataaaattcaaaactcaaacctaataaagaaattagaattaacctatatgtat
aatgaaggagaagatagttacttttcttctggaaacaagaatggtgatcatggctcttct
aatatgaattcgtcagataggaagagattaatggaggaaactggaaacaatggaaacttc
tccaataaaaaattcaagagagactcagagcttccaacagaagtccttgatttattgagt
gtcataccaaaacgtcaatatttcaacgccaatttgcttgatgcacagaaattggttaat
ttcttaaatgatcaagtagagattccaacagtcgacagcaccaaatctggttaa

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