Saccharomyces paradoxus: SPAR_M01800
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Entry
SPAR_M01800 CDS
T08193
Name
(RefSeq) Rna14
KO
K14408
cleavage stimulation factor subunit 3
Organism
spao
Saccharomyces paradoxus
Pathway
spao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SPAR_M01800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spao03019
]
SPAR_M01800
Messenger RNA biogenesis [BR:
spao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
SPAR_M01800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Motif
Other DBs
NCBI-GeneID:
54632757
NCBI-ProteinID:
XP_033768367
UniProt:
A0A8B8UX75
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Position
XIII:<376112..>378145
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AA seq
677 aa
AA seq
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MSSSTTPDLLYPSADKAAGSSDNIHGDELRLRERIKDNPTDILSYFQLIQYLETQESYAK
VREVYEQFHNTFPFYSPAWTLQLKGELARDEFETVEKILAQCLSGKLENNDLSLWSTYLD
YIRRKNNLITGGQEARAVIVKAFQLVMQKCAIFEPKSSSFWNEYLNFLEQWKPFNKWEEQ
QRIDMLREFYKKMLCVPFDNLEKMWNRYTQWEQEINSLTARKFIGELSAEYMKARSLYQE
WLNVTNGLKRASPINLRTANKKNIPQSGTSDSNIQQLQIWLNWIKWERENKLILSEDVLS
QRINYVYKQGIQYMIFSAEMWYDYSMYISENSDRQNILYTALLANPDSPSLTFKLSECYE
LDNDSESVSNCFDRCTQTLLSQYKKIASDINTSEDNNTGNEQEMVYKQREKLTFVFCVYM
NTMKRISGLSAARIVFGKCRKLKRILTHDVYVENAYLEFQNQNDYKTAFKVLELGLKYFQ
NDGVYINKYLDFLIFLNKDSQIKTLFETSVEKVQDLTQLKAIYKKMISYESKFGNLNNVY
SLEKRFFKRFPQENLIEAFTSRYKIQNSNLIKKLELTYMYNEGEDSYFSSGNKNGDHGSS
NMNSSDRKRLMEETGNNGNFSNKKFKRDSELPTEVLDLLSVIPKRQYFNANLLDAQKLVN
FLNDQVEIPTVDSTKSG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctctacgactcctgacttattatatccctctgcggataaagctgcagggtct
agtgacaatatacatggagatgaattacgacttagagaaaggattaaagacaaccccacc
gatattttatcttatttccaactcattcaatatttagaaactcaagagtcgtacgctaaa
gtgagagaagtatacgagcagtttcataacacattcccgttttattcacctgcgtggact
ttacaattgaagggtgaattggcaagagatgaatttgagacggttgagaagattctggcg
caatgcctttctggtaagttggaaaataatgacctatctctttggtcaacatatttggac
tacatacgcaggaaaaacaacttaatcaccggtggacaagaagcgagagccgttattgtc
aaggcattccaattagttatgcaaaagtgtgcaatttttgaacccaagtcatcctctttt
tggaatgaatatctcaatttcttagagcagtggaagccattcaacaaatgggaagagcaa
caacggattgacatgctcagggaattctacaagaaaatgttatgtgttccctttgataat
ttagagaaaatgtggaatagatacactcaatgggaacaagaaataaattcgctaacagcc
agaaagttcattggtgaattatcggccgaatacatgaaagcccgttccttgtaccaagaa
tggctgaatgttactaatggattgaaaagggcatccccaatcaatctgcgcacagcaaac
aagaaaaacataccacaatcaggtacatcagactcaaacattcagcagttacaaatttgg
ttgaattggataaagtgggaaagggaaaataaattaattcttagtgaagatgtgctatca
caaaggatcaattatgtttataaacaaggtattcaatacatgatattttctgctgaaatg
tggtacgattattcaatgtatatatctgaaaattcggatcgacaaaatatcttatatact
gcgttattagctaatcccgactcaccttctcttacattcaaattatccgaatgttacgaa
ctggataatgattctgaaagtgtttctaactgctttgacagatgtactcaaactttgcta
tcgcaatataagaagattgcttccgatataaatacgagtgaagacaataacacagggaat
gaacaagagatggtatacaaacaaagggaaaaattaacattcgtattttgcgtgtatatg
aatacgatgaaaagaatatcgggactgtccgcagcacgtattgtattcggtaaatgtcgt
aaactgaaacgtatattaacacatgacgtctacgtggaaaatgcatacttagaatttcaa
aatcaaaatgattataagacagcttttaaggttctagaactgggtttgaaatacttccaa
aacgatggagtttatatcaacaaatacttagattttttaatatttttaaataaggattca
cagatcaaaaccttatttgaaacatccgtggaaaaagttcaagatttaacccagttgaag
gcaatatacaagaaaatgataagttatgaatccaagtttggcaacttaaacaacgtttat
tctctggagaaaagattttttaaaaggttcccccaagaaaatttaattgaggctttcaca
agccgttataaaattcaaaactcaaacctaataaagaaattagaattaacctatatgtat
aatgaaggagaagatagttacttttcttctggaaacaagaatggtgatcatggctcttct
aatatgaattcgtcagataggaagagattaatggaggaaactggaaacaatggaaacttc
tccaataaaaaattcaagagagactcagagcttccaacagaagtccttgatttattgagt
gtcataccaaaacgtcaatatttcaacgccaatttgcttgatgcacagaaattggttaat
ttcttaaatgatcaagtagagattccaacagtcgacagcaccaaatctggttaa
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