Saccharomyces paradoxus: SPAR_M01990 Help Entry SPAR_M01990       CDS       T08193                                  Name (RefSeq) Nam7   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism spao  Saccharomyces paradoxus Pathway spao03013   Nucleocytoplasmic transport spao03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:spao00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     SPAR_M01990    03015 mRNA surveillance pathway     SPAR_M01990  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:spao03019]     SPAR_M01990 Enzymes [BR:spao01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      SPAR_M01990     5.6.2.5  RNA 5'-3' helicase      SPAR_M01990 Messenger RNA biogenesis [BR:spao03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      SPAR_M01990    mRNA cycle factors     Common to processing body (P body) and stress granule      SPAR_M01990 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII SLFN-g3_helicase UvrD-helicase NPHP3_N DEAD PIF1 nSTAND3 Helicase_RecD PhoH AAA_22 AAA_16 T2SSE Motif Other DBs NCBI-GeneID:  54632776 NCBI-ProteinID:  XP_033768386 UniProt:  A0A8B8UXF1 LinkDB All DBs Position XIII:complement(411132..414047) Genome browser AA seq 971 aa AA seqDB search MVGSGSHTPYDISNSPSDVNVQPATQLNSTLVEDDDVDNQLFEEAQITDTGFRSASASDN SCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIINHLVLSHHNVVSLHPESDLGDTVL ECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCAQTKNANWDTDQWQPLIEDRQLLSWVAE QPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEAIPPLLLRYQDAYEYQR SYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMI LWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTSPPTHLTTGFTAEFIWKGTSYDR MQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSILNFAQLNSSQSNAVSHV LQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVV RLTAKSREDVESSVSNLALHNLVGRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTE AEILNKADVVCCTCVGAGDKRLDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQ QLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNG VTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRDG VKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVRA NEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTLD NLQLCTVQLVRPQPRKTERPINPQFNVESEMGDFPKFQDFDAQSMMSFSGQIGNFSNAFV DNTELSSYINNEYWNFENFKSAFSQKQNRNEIDDRNLYQEEASHLNSNFARELQREEQKH ELSKDFSNLGI NT seq 2916 nt NT seq  +upstreamnt  +downstreamnt atggtcggttccggttctcacactccttatgatatatcaaactctccctctgatgtaaat gtccaacctgcaacacaactaaattccaccttggtggaagatgacgatgtggataatcag ctgttcgaagaggctcaaatcactgacactggattccgttctgcatcagcttccgacaat tcatgtgcgtattgtggcatagattctgcaaagtgtgtcatcaaatgtaattcatgtaag aaatggttttgtaacactaaaaacggtacaagtagttctcacattattaatcacttagtt ttatctcaccataacgtggtttcgttacatccagaatccgacttaggggataccgtattg gaatgttataattgtggacgcaagaacgtgtttttgctgggatttgtttccgctaaaagt gaggctgtggttgttttactttgtagaataccttgtgcccagacgaaaaatgcaaactgg gatactgatcaatggcaacccttaattgaagatagacaacttttatcatgggtcgcagaa caacctactgaagaggagaaattgaaggctcgcctaatcacgcccagccaaatttccaaa ttggaggcaaaatggagatctaataaagatgccacgattaacgatattgacgcccctgag gaacaagaagcaattccacctttattattaagatatcaagacgcctatgaataccaaaga tcttacggacctttaattaaattagaggctgactacgataaacaactcaaggaatctcaa gctttggaacatatttctgtttcgtggtccttagctttaaataacaggcatttagcatct ttcactttatctactttcgaatctaatgagttaaaagttgccatcggtgatgaaatgata ttatggtactctggcatgcaacatcctgactgggaaggtcgtggttacattgttcgcttg ccaaatagcttccaggatacattcacgttggagttaaaaccaagtaaaacttcaccgcca acgcacttgaccactggttttactgctgagttcatctggaaaggtacttcttatgacagg atgcaagatgcgttgaaaaaatttgccattgataaaaaatccatttcaggttatttgtac tataaaattttaggccatcaagtggttgacatttcatttgacgtcccattaccaaaggag ttctcgattctgaattttgctcaattaaactcatctcagtccaacgccgttagccatgtc ttgcaacgcccattatctttaattcaaggccctccaggtactggtaaaacagttacttct gcaacgatagtatatcatctttccaaaatacacaaggataggatattggtgtgcgcccca tccaacgttgctgtggatcatttggcggccaaattgcgtgacttgggtttgaaagttgtt agacttactgcaaagagtagggaagacgttgaaagttcagtctccaacttagctttgcat aatttggttggccgtggtgctaaaggggaattaaaaaacctattaaagctaaaggatgaa gttggcgaattatccgcttctgatacaaaacgatttgtcaaattagtaaggaaaacagag gctgaaattctaaataaggcagacgttgtatgttgcacatgtgttggtgctggtgataag cgcttagacactaaattcaggaccgtgttgattgatgaaagtactcaagcttctgagccg gaatgtttaatcccaattgttaaaggcgccaaacaagttatacttgttggtgatcaccag caattgggcccggtcatattagaacgaaaggctgcagacgccggtttgaaacagtccctt ttcgagagattaatctctctaggtcacgtaccaattcgtttggaagttcaatatcgtatg aacccttatttgagtgagttcccgagtaacatgttttatgaaggcagcctacaaaatggt gtaacgatcgagcagcgtaccgttcccaatagtaaatttccatggccaattcgtggtata ccaatgatgttctgggccaattacggtagagaggagatttccgctaacggtacttccttc ttgaacagaatcgaagccatgaactgtgagcgaatcattactaaacttttcagagacggt gttaagcccgagcaaattggtgttattacaccatatgagggacaaagagcttatatttta cagtatatgcaaatgaatggttccttggataaggatttgtatatcaaggtagaagttgct tcagttgacgcattccaaggtcgtgaaaaggattacatcatcttatcgtgcgtccgtgcc aatgaacaacaggccataggtttcttacgtgaccctcgtcgtttgaacgtgggcctaacc cgtgccaaatatggtctagtcattcttggtaatcctagatctttagcaagaaacacatta tggaaccatctgttaattcactttagagaaaaaggatgtttagtcgaaggtacattggat aacttacagttatgcactgttcaattagttcgccctcagccaagaaagactgaacggcca ataaatcctcaatttaacgtagagtctgagatgggtgactttccaaaattccaggatttc gatgcacaaagtatgatgtcattcagcggacaaattggtaattttagtaatgcttttgtt gataacacagagctttcttcttacattaataatgaatattggaattttgaaaacttcaaa agcgctttttctcagaagcagaatcgcaatgaaatagacgacaggaatctataccaggag gaggcttctcatttgaactctaattttgcgagggagctacagagagaagaacaaaagcat gaattgtcaaaagacttcagcaatttagggatataa

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